JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 16:20 4.7KJPred server log file
[TXT]README2016-02-15 12:16 2.1KResults file descriptions
[TXT]d1e7la1.name2015-04-17 15:56 0 Job name flag file
[ ]jp_3XPDXPQ.align2015-04-17 16:20 1.1KPSIBLAST alignment in FASTA format
[TXT]jp_3XPDXPQ.als2015-04-17 16:20 1.6KAlscript command file for PS/PDF output
[ ]jp_3XPDXPQ.blast.gz2015-04-17 16:20 3.2KCompressed PSIBLAST output file
[TXT]jp_3XPDXPQ.coils.csv2015-04-17 16:20 354 COILS output in CSV format
[ ]jp_3XPDXPQ.coilseq.lupas_142015-04-17 16:20 2.3KCOILS output, window length 14
[ ]jp_3XPDXPQ.coilseq.lupas_212015-04-17 16:20 2.3KCOILS output, window length 21
[ ]jp_3XPDXPQ.coilseq.lupas_282015-04-17 16:20 2.3KCOILS output, window length 28
[ ]jp_3XPDXPQ.concise2015-04-17 16:20 4.5KPrediction: coiled-coil, solvent, alignment
[ ]jp_3XPDXPQ.concise.blc2015-04-17 16:20 2.0KBLC format prediction and alignment data
[ ]jp_3XPDXPQ.concise.fasta2015-04-17 16:20 1.8KPrediction: coiled-coil, solvent, alignment
[ ]jp_3XPDXPQ.concise.pdf2015-04-17 16:20 14KPDF prediction and alignment data
[ ]jp_3XPDXPQ.concise.ps2015-04-17 16:20 216KPrediction: coiled-coil, solvent, alignment
[ ]jp_3XPDXPQ.fasta2015-04-17 16:15 67 Input query sequence in FASTA format
[ ]jp_3XPDXPQ.full_MSA.fasta2015-04-17 16:20 1.6KFull MSA before JPred filters in FASTA
[TXT]jp_3XPDXPQ.full_MSA.fasta.noGaps.html2015-04-17 16:20 4.3KFull MSA before JPred filters in FASTA
[TXT]jp_3XPDXPQ.full_MSA.fasta.withGaps.html2015-04-17 16:20 4.3KFull MSA before JPred filters in FASTA
[ ]jp_3XPDXPQ.hmm2015-04-17 16:20 10KHHMer2 profile of the alignment
[TXT]jp_3XPDXPQ.html2015-04-17 16:20 11KHTML prediction and alignment data
[ ]jp_3XPDXPQ.input2015-04-17 15:56 61 Raw input data for analysis
[ ]jp_3XPDXPQ.jalview2015-04-17 16:20 1.9KJalview annotation file for alignment
[ ]jp_3XPDXPQ.jnet2015-04-17 16:20 2.1KJnet secondary structure output
[TXT]jp_3XPDXPQ.profile2015-04-17 16:18 9.1KPSIBLAST profile from alignment
[ ]jp_3XPDXPQ.pssm2015-04-17 16:20 12KPSIBLAST PSSM for Jnet
[TXT]jp_3XPDXPQ.results.html2016-02-15 12:16 32KJPred results page
[TXT]jp_3XPDXPQ.results_jalview.html2016-02-24 17:17 13KJalview results options
[TXT]jp_3XPDXPQ.results_jalview_app.html2016-02-24 17:17 16KHTML prediction and alignment data
[ ]jp_3XPDXPQ.seq2015-04-17 15:56 67 Sequence data file
[TXT]jp_3XPDXPQ.simple.html2015-04-17 16:20 1.0KBrief HTML: sequence and prediction only
[TXT]jp_3XPDXPQ.svg.html2015-04-17 16:20 24KJalview SVG summary of results
[ ]jp_3XPDXPQ.tar.gz2015-04-17 16:20 37KArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.