A Protein Secondary Structure Prediction Server
| Name | Last modified | Size | Description | |
|---|---|---|---|---|
![[TXT]](/icons/text.gif){kind=icon} | LOG | 2015-04-17 20:03 | 4.7K | JPred server log file |
| README | 2016-02-15 12:16 | 2.1K | Results file descriptions |
| d1e8ca1.name | 2015-04-17 17:09 | 0 | Job name flag file |
![[ ]](/icons/unknown.gif){kind=icon} | jp_kgyD8tu.align | 2015-04-17 20:02 | 119K | PSIBLAST alignment in FASTA format |
| jp_kgyD8tu.als | 2015-04-17 20:02 | 2.5K | Alscript command file for PS/PDF output |
![[ ]](/icons/compressed.gif){kind=icon} | jp_kgyD8tu.blast.gz | 2015-04-17 20:01 | 3.0M | Compressed PSIBLAST output file |
| jp_kgyD8tu.coils.csv | 2015-04-17 20:02 | 636 | COILS output in CSV format |
| jp_kgyD8tu.coilseq.lupas_14 | 2015-04-17 20:02 | 4.2K | COILS output, window length 14 |
| jp_kgyD8tu.coilseq.lupas_21 | 2015-04-17 20:02 | 4.2K | COILS output, window length 21 |
| jp_kgyD8tu.coilseq.lupas_28 | 2015-04-17 20:02 | 4.2K | COILS output, window length 28 |
| jp_kgyD8tu.concise | 2015-04-17 20:02 | 228K | Prediction: coiled-coil, solvent, alignment |
| jp_kgyD8tu.concise.blc | 2015-04-17 20:02 | 118K | BLC format prediction and alignment data |
| jp_kgyD8tu.concise.fasta | 2015-04-17 20:02 | 120K | Prediction: coiled-coil, solvent, alignment |
![[ ]](/icons/layout.gif){kind=icon} | jp_kgyD8tu.concise.pdf | 2015-04-17 20:02 | 760K | PDF prediction and alignment data |
| jp_kgyD8tu.concise.ps | 2015-04-17 20:02 | 13M | Prediction: coiled-coil, solvent, alignment |
| jp_kgyD8tu.fasta | 2015-04-17 18:12 | 115 | Input query sequence in FASTA format |
| jp_kgyD8tu.full_MSA.fasta | 2015-04-17 20:02 | 7.3M | Full MSA before JPred filters in FASTA |
| jp_kgyD8tu.full_MSA.fasta.noGaps.html | 2015-04-17 20:03 | 1.7M | Full MSA before JPred filters in FASTA |
| jp_kgyD8tu.full_MSA.fasta.withGaps.html | 2015-04-17 20:03 | 24M | Full MSA before JPred filters in FASTA |
| jp_kgyD8tu.hmm | 2015-04-17 20:02 | 19K | HHMer2 profile of the alignment |
| jp_kgyD8tu.html | 2015-04-17 20:02 | 321K | HTML prediction and alignment data |
| jp_kgyD8tu.input | 2015-04-17 17:09 | 108 | Raw input data for analysis |
| jp_kgyD8tu.jalview | 2015-04-17 20:02 | 2.9K | Jalview annotation file for alignment |
| jp_kgyD8tu.jnet | 2015-04-17 20:02 | 3.8K | Jnet secondary structure output |
| jp_kgyD8tu.profile | 2015-04-17 19:58 | 16K | PSIBLAST profile from alignment |
| jp_kgyD8tu.pssm | 2015-04-17 20:02 | 22K | PSIBLAST PSSM for Jnet |
| jp_kgyD8tu.results.html | 2016-02-15 12:16 | 51K | JPred results page |
| jp_kgyD8tu.results_jalview.html | 2016-02-24 17:17 | 13K | Jalview results options |
| jp_kgyD8tu.results_jalview_app.html | 2016-02-24 17:17 | 16K | HTML prediction and alignment data |
| jp_kgyD8tu.seq | 2015-04-17 17:09 | 115 | Sequence data file |
| jp_kgyD8tu.simple.html | 2015-04-17 20:02 | 1.3K | Brief HTML: sequence and prediction only |
![[TXT]](jp_kgyD8tu.svg.html) | jp_kgyD8tu.svg.html | 2015-04-17 20:03 | 43K | Jalview SVG summary of results |
| jp_kgyD8tu.tar.gz | 2015-04-17 20:03 | 6.4M | Archive containing complete results |
