JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 21:18 4.7KJPred server log file
[TXT]README2016-02-15 12:16 2.1KResults file descriptions
[TXT]d1eexb_.name2015-04-17 19:00 0 Job name flag file
[ ]jp_JuaJtU8.align2015-04-17 21:18 31KPSIBLAST alignment in FASTA format
[TXT]jp_JuaJtU8.als2015-04-17 21:18 3.0KAlscript command file for PS/PDF output
[ ]jp_JuaJtU8.blast.gz2015-04-17 21:18 72KCompressed PSIBLAST output file
[TXT]jp_JuaJtU8.coils.csv2015-04-17 21:18 1.1KCOILS output in CSV format
[ ]jp_JuaJtU8.coilseq.lupas_142015-04-17 21:18 7.5KCOILS output, window length 14
[ ]jp_JuaJtU8.coilseq.lupas_212015-04-17 21:18 7.5KCOILS output, window length 21
[ ]jp_JuaJtU8.coilseq.lupas_282015-04-17 21:18 7.5KCOILS output, window length 28
[ ]jp_JuaJtU8.concise2015-04-17 21:18 67KPrediction: coiled-coil, solvent, alignment
[ ]jp_JuaJtU8.concise.blc2015-04-17 21:18 33KBLC format prediction and alignment data
[ ]jp_JuaJtU8.concise.fasta2015-04-17 21:18 33KPrediction: coiled-coil, solvent, alignment
[ ]jp_JuaJtU8.concise.pdf2015-04-17 21:18 200KPDF prediction and alignment data
[ ]jp_JuaJtU8.concise.ps2015-04-17 21:18 3.8MPrediction: coiled-coil, solvent, alignment
[ ]jp_JuaJtU8.fasta2015-04-17 21:11 193 Input query sequence in FASTA format
[ ]jp_JuaJtU8.full_MSA.fasta2015-04-17 21:18 81KFull MSA before JPred filters in FASTA
[TXT]jp_JuaJtU8.full_MSA.fasta.noGaps.html2015-04-17 21:18 85KFull MSA before JPred filters in FASTA
[TXT]jp_JuaJtU8.full_MSA.fasta.withGaps.html2015-04-17 21:18 370KFull MSA before JPred filters in FASTA
[ ]jp_JuaJtU8.hmm2015-04-17 21:18 33KHHMer2 profile of the alignment
[TXT]jp_JuaJtU8.html2015-04-17 21:18 79KHTML prediction and alignment data
[ ]jp_JuaJtU8.input2015-04-17 19:00 185 Raw input data for analysis
[ ]jp_JuaJtU8.jalview2015-04-17 21:18 4.4KJalview annotation file for alignment
[ ]jp_JuaJtU8.jnet2015-04-17 21:18 6.5KJnet secondary structure output
[TXT]jp_JuaJtU8.profile2015-04-17 21:15 29KPSIBLAST profile from alignment
[ ]jp_JuaJtU8.pssm2015-04-17 21:18 38KPSIBLAST PSSM for Jnet
[TXT]jp_JuaJtU8.results.html2016-02-15 12:16 80KJPred results page
[TXT]jp_JuaJtU8.results_jalview.html2016-02-24 17:17 13KJalview results options
[TXT]jp_JuaJtU8.results_jalview_app.html2016-02-24 17:17 16KHTML prediction and alignment data
[ ]jp_JuaJtU8.seq2015-04-17 19:00 193 Sequence data file
[TXT]jp_JuaJtU8.simple.html2015-04-17 21:18 1.5KBrief HTML: sequence and prediction only
[TXT]jp_JuaJtU8.svg.html2015-04-17 21:18 72KJalview SVG summary of results
[ ]jp_JuaJtU8.tar.gz2015-04-17 21:18 383KArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.