JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]d1ef1c_.name2015-04-17 17:09 0 Job name flag file
[ ]jp_os3cv5O.input2015-04-17 17:09 97 Raw input data for analysis
[ ]jp_os3cv5O.fasta2015-04-17 18:12 104 Input query sequence in FASTA format
[ ]jp_os3cv5O.seq2015-04-17 17:09 104 Sequence data file
[TXT]jp_os3cv5O.coils.csv2015-04-17 19:57 570 COILS output in CSV format
[TXT]jp_os3cv5O.simple.html2015-04-17 19:57 1.1KBrief HTML: sequence and prediction only
[TXT]jp_os3cv5O.als2015-04-17 19:57 1.9KAlscript command file for PS/PDF output
[TXT]README2016-02-15 12:16 2.1KResults file descriptions
[ ]jp_os3cv5O.jalview2015-04-17 19:57 2.7KJalview annotation file for alignment
[ ]jp_os3cv5O.jnet2015-04-17 19:57 3.4KJnet secondary structure output
[ ]jp_os3cv5O.coilseq.lupas_142015-04-17 19:57 3.8KCOILS output, window length 14
[ ]jp_os3cv5O.coilseq.lupas_212015-04-17 19:57 3.8KCOILS output, window length 21
[ ]jp_os3cv5O.coilseq.lupas_282015-04-17 19:57 3.8KCOILS output, window length 28
[TXT]LOG2015-04-17 19:57 4.7KJPred server log file
[ ]jp_os3cv5O.align2015-04-17 19:57 9.1KPSIBLAST alignment in FASTA format
[ ]jp_os3cv5O.concise.fasta2015-04-17 19:57 10KPrediction: coiled-coil, solvent, alignment
[ ]jp_os3cv5O.concise.blc2015-04-17 19:57 10KBLC format prediction and alignment data
[TXT]jp_os3cv5O.results_jalview.html2016-02-24 17:17 13KJalview results options
[TXT]jp_os3cv5O.profile2015-04-17 19:43 15KPSIBLAST profile from alignment
[TXT]jp_os3cv5O.results_jalview_app.html2016-02-24 17:17 16KHTML prediction and alignment data
[ ]jp_os3cv5O.hmm2015-04-17 19:57 17KHHMer2 profile of the alignment
[ ]jp_os3cv5O.pssm2015-04-17 19:57 19KPSIBLAST PSSM for Jnet
[ ]jp_os3cv5O.concise2015-04-17 19:57 21KPrediction: coiled-coil, solvent, alignment
[TXT]jp_os3cv5O.html2015-04-17 19:57 37KHTML prediction and alignment data
[TXT]jp_os3cv5O.svg.html2015-04-17 19:57 38KJalview SVG summary of results
[TXT]jp_os3cv5O.results.html2016-02-15 12:16 46KJPred results page
[ ]jp_os3cv5O.blast.gz2015-04-17 19:56 51KCompressed PSIBLAST output file
[TXT]jp_os3cv5O.full_MSA.fasta.noGaps.html2015-04-17 19:57 57KFull MSA before JPred filters in FASTA
[ ]jp_os3cv5O.concise.pdf2015-04-17 19:57 64KPDF prediction and alignment data
[ ]jp_os3cv5O.full_MSA.fasta2015-04-17 19:57 73KFull MSA before JPred filters in FASTA
[ ]jp_os3cv5O.tar.gz2015-04-17 19:57 180KArchive containing complete results
[TXT]jp_os3cv5O.full_MSA.fasta.withGaps.html2015-04-17 19:57 258KFull MSA before JPred filters in FASTA
[ ]jp_os3cv5O.concise.ps2015-04-17 19:57 1.1MPrediction: coiled-coil, solvent, alignment
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.