JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 19:47 4.7KJPred server log file
[TXT]README2016-02-15 12:16 2.1KResults file descriptions
[TXT]d1eu1a2.name2015-04-17 17:47 0 Job name flag file
[ ]jp_cv3iMNP.align2015-04-17 19:44 439KPSIBLAST alignment in FASTA format
[TXT]jp_cv3iMNP.als2015-04-17 19:44 6.2KAlscript command file for PS/PDF output
[ ]jp_cv3iMNP.blast.gz2015-04-17 19:36 52MCompressed PSIBLAST output file
[TXT]jp_cv3iMNP.coils.csv2015-04-17 19:44 3.6KCOILS output in CSV format
[ ]jp_cv3iMNP.coilseq.lupas_142015-04-17 19:44 26KCOILS output, window length 14
[ ]jp_cv3iMNP.coilseq.lupas_212015-04-17 19:44 26KCOILS output, window length 21
[ ]jp_cv3iMNP.coilseq.lupas_282015-04-17 19:44 26KCOILS output, window length 28
[ ]jp_cv3iMNP.concise2015-04-17 19:44 885KPrediction: coiled-coil, solvent, alignment
[ ]jp_cv3iMNP.concise.blc2015-04-17 19:44 442KBLC format prediction and alignment data
[ ]jp_cv3iMNP.concise.fasta2015-04-17 19:44 445KPrediction: coiled-coil, solvent, alignment
[ ]jp_cv3iMNP.concise.pdf2015-04-17 19:45 3.1MPDF prediction and alignment data
[ ]jp_cv3iMNP.concise.ps2015-04-17 19:44 56MPrediction: coiled-coil, solvent, alignment
[ ]jp_cv3iMNP.fasta2015-04-17 19:13 633 Input query sequence in FASTA format
[ ]jp_cv3iMNP.full_MSA.fasta2015-04-17 19:41 105MFull MSA before JPred filters in FASTA
[TXT]jp_cv3iMNP.full_MSA.fasta.noGaps.html2015-04-17 19:47 7.2MFull MSA before JPred filters in FASTA
[TXT]jp_cv3iMNP.full_MSA.fasta.withGaps.html2015-04-17 19:47 248MFull MSA before JPred filters in FASTA
[ ]jp_cv3iMNP.hmm2015-04-17 19:44 115KHHMer2 profile of the alignment
[TXT]jp_cv3iMNP.html2015-04-17 19:44 617KHTML prediction and alignment data
[ ]jp_cv3iMNP.input2015-04-17 17:47 619 Raw input data for analysis
[ ]jp_cv3iMNP.jalview2015-04-17 19:44 13KJalview annotation file for alignment
[ ]jp_cv3iMNP.jnet2015-04-17 19:44 22KJnet secondary structure output
[TXT]jp_cv3iMNP.profile2015-04-17 19:32 97KPSIBLAST profile from alignment
[ ]jp_cv3iMNP.pssm2015-04-17 19:44 131KPSIBLAST PSSM for Jnet
[TXT]jp_cv3iMNP.results.html2016-02-15 12:16 248KJPred results page
[TXT]jp_cv3iMNP.results_jalview.html2016-02-24 17:17 13KJalview results options
[TXT]jp_cv3iMNP.results_jalview_app.html2016-02-24 17:17 16KHTML prediction and alignment data
[ ]jp_cv3iMNP.seq2015-04-17 17:47 633 Sequence data file
[TXT]jp_cv3iMNP.simple.html2015-04-17 19:44 2.8KBrief HTML: sequence and prediction only
[TXT]jp_cv3iMNP.svg.html2015-04-17 19:47 240KJalview SVG summary of results
[ ]jp_cv3iMNP.tar.gz2015-04-17 19:47 80MArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.