JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 19:21 4.7KJPred server log file
[TXT]README2016-02-15 12:16 2.1KResults file descriptions
[TXT]d1euwa_.name2015-04-17 17:47 0 Job name flag file
[ ]jp_QsUnbPs.align2015-04-17 19:20 131KPSIBLAST alignment in FASTA format
[TXT]jp_QsUnbPs.als2015-04-17 19:20 3.2KAlscript command file for PS/PDF output
[ ]jp_QsUnbPs.blast.gz2015-04-17 19:19 3.7MCompressed PSIBLAST output file
[TXT]jp_QsUnbPs.coils.csv2015-04-17 19:20 846 COILS output in CSV format
[ ]jp_QsUnbPs.coilseq.lupas_142015-04-17 19:20 5.7KCOILS output, window length 14
[ ]jp_QsUnbPs.coilseq.lupas_212015-04-17 19:20 5.7KCOILS output, window length 21
[ ]jp_QsUnbPs.coilseq.lupas_282015-04-17 19:20 5.7KCOILS output, window length 28
[ ]jp_QsUnbPs.concise2015-04-17 19:20 257KPrediction: coiled-coil, solvent, alignment
[ ]jp_QsUnbPs.concise.blc2015-04-17 19:20 132KBLC format prediction and alignment data
[ ]jp_QsUnbPs.concise.fasta2015-04-17 19:20 133KPrediction: coiled-coil, solvent, alignment
[ ]jp_QsUnbPs.concise.pdf2015-04-17 19:20 916KPDF prediction and alignment data
[ ]jp_QsUnbPs.concise.ps2015-04-17 19:20 16MPrediction: coiled-coil, solvent, alignment
[ ]jp_QsUnbPs.fasta2015-04-17 19:13 150 Input query sequence in FASTA format
[ ]jp_QsUnbPs.full_MSA.fasta2015-04-17 19:20 8.8MFull MSA before JPred filters in FASTA
[TXT]jp_QsUnbPs.full_MSA.fasta.noGaps.html2015-04-17 19:21 1.2MFull MSA before JPred filters in FASTA
[TXT]jp_QsUnbPs.full_MSA.fasta.withGaps.html2015-04-17 19:21 23MFull MSA before JPred filters in FASTA
[ ]jp_QsUnbPs.hmm2015-04-17 19:20 26KHHMer2 profile of the alignment
[TXT]jp_QsUnbPs.html2015-04-17 19:20 309KHTML prediction and alignment data
[ ]jp_QsUnbPs.input2015-04-17 17:47 143 Raw input data for analysis
[ ]jp_QsUnbPs.jalview2015-04-17 19:20 3.5KJalview annotation file for alignment
[ ]jp_QsUnbPs.jnet2015-04-17 19:20 5.0KJnet secondary structure output
[TXT]jp_QsUnbPs.profile2015-04-17 19:17 22KPSIBLAST profile from alignment
[ ]jp_QsUnbPs.pssm2015-04-17 19:20 29KPSIBLAST PSSM for Jnet
[TXT]jp_QsUnbPs.results.html2016-02-15 12:16 65KJPred results page
[TXT]jp_QsUnbPs.results_jalview.html2016-02-24 17:17 13KJalview results options
[TXT]jp_QsUnbPs.results_jalview_app.html2016-02-24 17:17 16KHTML prediction and alignment data
[ ]jp_QsUnbPs.seq2015-04-17 17:47 150 Sequence data file
[TXT]jp_QsUnbPs.simple.html2015-04-17 19:20 1.5KBrief HTML: sequence and prediction only
[TXT]jp_QsUnbPs.svg.html2015-04-17 19:21 57KJalview SVG summary of results
[ ]jp_QsUnbPs.tar.gz2015-04-17 19:21 6.6MArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.