JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 18:17 4.7KJPred server log file
[TXT]README2016-02-15 12:16 2.1KResults file descriptions
[TXT]d1ezga_.name2015-04-17 17:10 0 Job name flag file
[ ]jp_g0bYbTL.align2015-04-17 18:16 20KPSIBLAST alignment in FASTA format
[TXT]jp_g0bYbTL.als2015-04-17 18:17 1.1KAlscript command file for PS/PDF output
[ ]jp_g0bYbTL.blast.gz2015-04-17 18:16 30KCompressed PSIBLAST output file
[TXT]jp_g0bYbTL.coils.csv2015-04-17 18:17 522 COILS output in CSV format
[ ]jp_g0bYbTL.coilseq.lupas_142015-04-17 18:17 3.4KCOILS output, window length 14
[ ]jp_g0bYbTL.coilseq.lupas_212015-04-17 18:17 3.4KCOILS output, window length 21
[ ]jp_g0bYbTL.coilseq.lupas_282015-04-17 18:17 3.4KCOILS output, window length 28
[ ]jp_g0bYbTL.concise2015-04-17 18:17 41KPrediction: coiled-coil, solvent, alignment
[ ]jp_g0bYbTL.concise.blc2015-04-17 18:17 21KBLC format prediction and alignment data
[ ]jp_g0bYbTL.concise.fasta2015-04-17 18:17 22KPrediction: coiled-coil, solvent, alignment
[ ]jp_g0bYbTL.concise.pdf2015-04-17 18:17 85KPDF prediction and alignment data
[ ]jp_g0bYbTL.concise.ps2015-04-17 18:17 2.0MPrediction: coiled-coil, solvent, alignment
[ ]jp_g0bYbTL.fasta2015-04-17 18:13 96 Input query sequence in FASTA format
[ ]jp_g0bYbTL.full_MSA.fasta2015-04-17 18:16 88KFull MSA before JPred filters in FASTA
[TXT]jp_g0bYbTL.full_MSA.fasta.noGaps.html2015-04-17 18:17 56KFull MSA before JPred filters in FASTA
[TXT]jp_g0bYbTL.full_MSA.fasta.withGaps.html2015-04-17 18:17 346KFull MSA before JPred filters in FASTA
[ ]jp_g0bYbTL.hmm2015-04-17 18:17 15KHHMer2 profile of the alignment
[TXT]jp_g0bYbTL.html2015-04-17 18:17 64KHTML prediction and alignment data
[ ]jp_g0bYbTL.input2015-04-17 17:10 89 Raw input data for analysis
[ ]jp_g0bYbTL.jalview2015-04-17 18:17 2.3KJalview annotation file for alignment
[ ]jp_g0bYbTL.jnet2015-04-17 18:17 3.1KJnet secondary structure output
[TXT]jp_g0bYbTL.profile2015-04-17 18:15 13KPSIBLAST profile from alignment
[ ]jp_g0bYbTL.pssm2015-04-17 18:16 18KPSIBLAST PSSM for Jnet
[TXT]jp_g0bYbTL.results.html2016-02-15 12:16 39KJPred results page
[TXT]jp_g0bYbTL.results_jalview.html2016-02-24 17:17 13KJalview results options
[TXT]jp_g0bYbTL.results_jalview_app.html2016-02-24 17:17 16KHTML prediction and alignment data
[ ]jp_g0bYbTL.seq2015-04-17 17:10 96 Sequence data file
[TXT]jp_g0bYbTL.simple.html2015-04-17 18:17 1.0KBrief HTML: sequence and prediction only
[TXT]jp_g0bYbTL.svg.html2015-04-17 18:17 31KJalview SVG summary of results
[ ]jp_g0bYbTL.tar.gz2015-04-17 18:17 161KArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.