JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 16:27 4.7KJPred server log file
[TXT]README2016-02-15 12:16 2.1KResults file descriptions
[TXT]d1f86a_.name2015-04-17 15:57 0 Job name flag file
[ ]jp_XPKvJtz.align2015-04-17 16:26 147KPSIBLAST alignment in FASTA format
[TXT]jp_XPKvJtz.als2015-04-17 16:26 2.5KAlscript command file for PS/PDF output
[ ]jp_XPKvJtz.blast.gz2015-04-17 16:23 934KCompressed PSIBLAST output file
[TXT]jp_XPKvJtz.coils.csv2015-04-17 16:26 720 COILS output in CSV format
[ ]jp_XPKvJtz.coilseq.lupas_142015-04-17 16:26 4.8KCOILS output, window length 14
[ ]jp_XPKvJtz.coilseq.lupas_212015-04-17 16:26 4.8KCOILS output, window length 21
[ ]jp_XPKvJtz.coilseq.lupas_282015-04-17 16:26 4.8KCOILS output, window length 28
[ ]jp_XPKvJtz.concise2015-04-17 16:26 283KPrediction: coiled-coil, solvent, alignment
[ ]jp_XPKvJtz.concise.blc2015-04-17 16:26 146KBLC format prediction and alignment data
[ ]jp_XPKvJtz.concise.fasta2015-04-17 16:26 148KPrediction: coiled-coil, solvent, alignment
[ ]jp_XPKvJtz.concise.pdf2015-04-17 16:26 938KPDF prediction and alignment data
[ ]jp_XPKvJtz.concise.ps2015-04-17 16:26 17MPrediction: coiled-coil, solvent, alignment
[ ]jp_XPKvJtz.fasta2015-04-17 16:15 129 Input query sequence in FASTA format
[ ]jp_XPKvJtz.full_MSA.fasta2015-04-17 16:23 2.0MFull MSA before JPred filters in FASTA
[TXT]jp_XPKvJtz.full_MSA.fasta.noGaps.html2015-04-17 16:26 425KFull MSA before JPred filters in FASTA
[TXT]jp_XPKvJtz.full_MSA.fasta.withGaps.html2015-04-17 16:26 4.8MFull MSA before JPred filters in FASTA
[ ]jp_XPKvJtz.hmm2015-04-17 16:26 22KHHMer2 profile of the alignment
[TXT]jp_XPKvJtz.html2015-04-17 16:26 370KHTML prediction and alignment data
[ ]jp_XPKvJtz.input2015-04-17 15:57 122 Raw input data for analysis
[ ]jp_XPKvJtz.jalview2015-04-17 16:26 3.1KJalview annotation file for alignment
[ ]jp_XPKvJtz.jnet2015-04-17 16:26 4.3KJnet secondary structure output
[TXT]jp_XPKvJtz.profile2015-04-17 16:21 19KPSIBLAST profile from alignment
[ ]jp_XPKvJtz.pssm2015-04-17 16:26 25KPSIBLAST PSSM for Jnet
[TXT]jp_XPKvJtz.results.html2016-02-15 12:16 55KJPred results page
[TXT]jp_XPKvJtz.results_jalview.html2016-02-24 17:17 13KJalview results options
[TXT]jp_XPKvJtz.results_jalview_app.html2016-02-24 17:17 16KHTML prediction and alignment data
[ ]jp_XPKvJtz.seq2015-04-17 15:57 129 Sequence data file
[TXT]jp_XPKvJtz.simple.html2015-04-17 16:26 1.3KBrief HTML: sequence and prediction only
[TXT]jp_XPKvJtz.svg.html2015-04-17 16:26 47KJalview SVG summary of results
[ ]jp_XPKvJtz.tar.gz2015-04-17 16:27 2.5MArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.