JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 19:21 4.7KJPred server log file
[TXT]README2016-02-15 12:16 2.1KResults file descriptions
[TXT]d1fm0e_.name2015-04-17 17:48 0 Job name flag file
[ ]jp_vwNDEHK.align2015-04-17 19:20 154KPSIBLAST alignment in FASTA format
[TXT]jp_vwNDEHK.als2015-04-17 19:20 2.9KAlscript command file for PS/PDF output
[ ]jp_vwNDEHK.blast.gz2015-04-17 19:20 1.6MCompressed PSIBLAST output file
[TXT]jp_vwNDEHK.coils.csv2015-04-17 19:20 882 COILS output in CSV format
[ ]jp_vwNDEHK.coilseq.lupas_142015-04-17 19:20 6.0KCOILS output, window length 14
[ ]jp_vwNDEHK.coilseq.lupas_212015-04-17 19:20 6.0KCOILS output, window length 21
[ ]jp_vwNDEHK.coilseq.lupas_282015-04-17 19:20 6.0KCOILS output, window length 28
[ ]jp_vwNDEHK.concise2015-04-17 19:20 301KPrediction: coiled-coil, solvent, alignment
[ ]jp_vwNDEHK.concise.blc2015-04-17 19:20 154KBLC format prediction and alignment data
[ ]jp_vwNDEHK.concise.fasta2015-04-17 19:20 156KPrediction: coiled-coil, solvent, alignment
[ ]jp_vwNDEHK.concise.pdf2015-04-17 19:21 1.0MPDF prediction and alignment data
[ ]jp_vwNDEHK.concise.ps2015-04-17 19:20 18MPrediction: coiled-coil, solvent, alignment
[ ]jp_vwNDEHK.fasta2015-04-17 19:15 156 Input query sequence in FASTA format
[ ]jp_vwNDEHK.full_MSA.fasta2015-04-17 19:20 2.7MFull MSA before JPred filters in FASTA
[TXT]jp_vwNDEHK.full_MSA.fasta.noGaps.html2015-04-17 19:21 761KFull MSA before JPred filters in FASTA
[TXT]jp_vwNDEHK.full_MSA.fasta.withGaps.html2015-04-17 19:21 9.1MFull MSA before JPred filters in FASTA
[ ]jp_vwNDEHK.hmm2015-04-17 19:20 27KHHMer2 profile of the alignment
[TXT]jp_vwNDEHK.html2015-04-17 19:20 356KHTML prediction and alignment data
[ ]jp_vwNDEHK.input2015-04-17 17:48 149 Raw input data for analysis
[ ]jp_vwNDEHK.jalview2015-04-17 19:20 3.7KJalview annotation file for alignment
[ ]jp_vwNDEHK.jnet2015-04-17 19:20 5.2KJnet secondary structure output
[TXT]jp_vwNDEHK.profile2015-04-17 19:18 23KPSIBLAST profile from alignment
[ ]jp_vwNDEHK.pssm2015-04-17 19:20 31KPSIBLAST PSSM for Jnet
[TXT]jp_vwNDEHK.results.html2016-02-15 12:16 67KJPred results page
[TXT]jp_vwNDEHK.results_jalview.html2016-02-24 17:17 13KJalview results options
[TXT]jp_vwNDEHK.results_jalview_app.html2016-02-24 17:17 16KHTML prediction and alignment data
[ ]jp_vwNDEHK.seq2015-04-17 17:48 156 Sequence data file
[TXT]jp_vwNDEHK.simple.html2015-04-17 19:20 1.4KBrief HTML: sequence and prediction only
[TXT]jp_vwNDEHK.svg.html2015-04-17 19:21 59KJalview SVG summary of results
[ ]jp_vwNDEHK.tar.gz2015-04-17 19:21 3.8MArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.