JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 18:22 4.7KJPred server log file
[TXT]README2016-02-15 12:16 2.1KResults file descriptions
[TXT]d1fs1a1.name2015-04-17 17:11 0 Job name flag file
[ ]jp_7exaeTE.align2015-04-17 18:22 45KPSIBLAST alignment in FASTA format
[TXT]jp_7exaeTE.als2015-04-17 18:22 1.4KAlscript command file for PS/PDF output
[ ]jp_7exaeTE.blast.gz2015-04-17 18:21 972KCompressed PSIBLAST output file
[TXT]jp_7exaeTE.coils.csv2015-04-17 18:22 276 COILS output in CSV format
[ ]jp_7exaeTE.coilseq.lupas_142015-04-17 18:22 1.7KCOILS output, window length 14
[ ]jp_7exaeTE.coilseq.lupas_212015-04-17 18:22 1.7KCOILS output, window length 21
[ ]jp_7exaeTE.coilseq.lupas_282015-04-17 18:22 1.7KCOILS output, window length 28
[ ]jp_7exaeTE.concise2015-04-17 18:22 82KPrediction: coiled-coil, solvent, alignment
[ ]jp_7exaeTE.concise.blc2015-04-17 18:22 44KBLC format prediction and alignment data
[ ]jp_7exaeTE.concise.fasta2015-04-17 18:22 45KPrediction: coiled-coil, solvent, alignment
[ ]jp_7exaeTE.concise.pdf2015-04-17 18:22 271KPDF prediction and alignment data
[ ]jp_7exaeTE.concise.ps2015-04-17 18:22 4.3MPrediction: coiled-coil, solvent, alignment
[ ]jp_7exaeTE.fasta2015-04-17 18:15 54 Input query sequence in FASTA format
[ ]jp_7exaeTE.full_MSA.fasta2015-04-17 18:21 2.3MFull MSA before JPred filters in FASTA
[TXT]jp_7exaeTE.full_MSA.fasta.noGaps.html2015-04-17 18:22 1.3MFull MSA before JPred filters in FASTA
[TXT]jp_7exaeTE.full_MSA.fasta.withGaps.html2015-04-17 18:22 10MFull MSA before JPred filters in FASTA
[ ]jp_7exaeTE.hmm2015-04-17 18:22 7.7KHHMer2 profile of the alignment
[TXT]jp_7exaeTE.html2015-04-17 18:22 197KHTML prediction and alignment data
[ ]jp_7exaeTE.input2015-04-17 17:11 48 Raw input data for analysis
[ ]jp_7exaeTE.jalview2015-04-17 18:22 1.6KJalview annotation file for alignment
[ ]jp_7exaeTE.jnet2015-04-17 18:22 1.6KJnet secondary structure output
[TXT]jp_7exaeTE.profile2015-04-17 18:19 7.0KPSIBLAST profile from alignment
[ ]jp_7exaeTE.pssm2015-04-17 18:22 8.8KPSIBLAST PSSM for Jnet
[TXT]jp_7exaeTE.results.html2016-02-15 12:16 27KJPred results page
[TXT]jp_7exaeTE.results_jalview.html2016-02-24 17:17 13KJalview results options
[TXT]jp_7exaeTE.results_jalview_app.html2016-02-24 17:17 16KHTML prediction and alignment data
[ ]jp_7exaeTE.seq2015-04-17 17:11 54 Sequence data file
[TXT]jp_7exaeTE.simple.html2015-04-17 18:22 1.0KBrief HTML: sequence and prediction only
[TXT]jp_7exaeTE.svg.html2015-04-17 18:22 19KJalview SVG summary of results
[ ]jp_7exaeTE.tar.gz2015-04-17 18:22 2.3MArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.