JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 19:22 4.7KJPred server log file
[TXT]README2016-02-15 12:17 2.1KResults file descriptions
[TXT]d1g6xa_.name2015-04-17 17:48 0 Job name flag file
[ ]jp_8BWDn7y.align2015-04-17 19:22 61KPSIBLAST alignment in FASTA format
[TXT]jp_8BWDn7y.als2015-04-17 19:22 1.6KAlscript command file for PS/PDF output
[ ]jp_8BWDn7y.blast.gz2015-04-17 19:22 1.7MCompressed PSIBLAST output file
[TXT]jp_8BWDn7y.coils.csv2015-04-17 19:22 378 COILS output in CSV format
[ ]jp_8BWDn7y.coilseq.lupas_142015-04-17 19:22 2.4KCOILS output, window length 14
[ ]jp_8BWDn7y.coilseq.lupas_212015-04-17 19:22 2.4KCOILS output, window length 21
[ ]jp_8BWDn7y.coilseq.lupas_282015-04-17 19:22 2.4KCOILS output, window length 28
[ ]jp_8BWDn7y.concise2015-04-17 19:22 116KPrediction: coiled-coil, solvent, alignment
[ ]jp_8BWDn7y.concise.blc2015-04-17 19:22 61KBLC format prediction and alignment data
[ ]jp_8BWDn7y.concise.fasta2015-04-17 19:22 62KPrediction: coiled-coil, solvent, alignment
[ ]jp_8BWDn7y.concise.pdf2015-04-17 19:22 297KPDF prediction and alignment data
[ ]jp_8BWDn7y.concise.ps2015-04-17 19:22 5.9MPrediction: coiled-coil, solvent, alignment
[ ]jp_8BWDn7y.fasta2015-04-17 19:15 71 Input query sequence in FASTA format
[ ]jp_8BWDn7y.full_MSA.fasta2015-04-17 19:22 3.3MFull MSA before JPred filters in FASTA
[TXT]jp_8BWDn7y.full_MSA.fasta.noGaps.html2015-04-17 19:22 1.4MFull MSA before JPred filters in FASTA
[TXT]jp_8BWDn7y.full_MSA.fasta.withGaps.html2015-04-17 19:22 12MFull MSA before JPred filters in FASTA
[ ]jp_8BWDn7y.hmm2015-04-17 19:22 11KHHMer2 profile of the alignment
[TXT]jp_8BWDn7y.html2015-04-17 19:22 223KHTML prediction and alignment data
[ ]jp_8BWDn7y.input2015-04-17 17:48 65 Raw input data for analysis
[ ]jp_8BWDn7y.jalview2015-04-17 19:22 2.0KJalview annotation file for alignment
[ ]jp_8BWDn7y.jnet2015-04-17 19:22 2.2KJnet secondary structure output
[TXT]jp_8BWDn7y.profile2015-04-17 19:18 9.7KPSIBLAST profile from alignment
[ ]jp_8BWDn7y.pssm2015-04-17 19:22 12KPSIBLAST PSSM for Jnet
[TXT]jp_8BWDn7y.results.html2016-02-15 12:17 33KJPred results page
[TXT]jp_8BWDn7y.results_jalview.html2016-02-24 17:17 13KJalview results options
[TXT]jp_8BWDn7y.results_jalview_app.html2016-02-24 17:17 16KHTML prediction and alignment data
[ ]jp_8BWDn7y.seq2015-04-17 17:48 71 Sequence data file
[TXT]jp_8BWDn7y.simple.html2015-04-17 19:22 1.0KBrief HTML: sequence and prediction only
[TXT]jp_8BWDn7y.svg.html2015-04-17 19:22 25KJalview SVG summary of results
[ ]jp_8BWDn7y.tar.gz2015-04-17 19:22 3.3MArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.