JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 18:55 4.7KJPred server log file
[TXT]README2016-02-15 12:17 2.1KResults file descriptions
[TXT]d1g7sa3.name2015-04-17 17:12 0 Job name flag file
[ ]jp_xriPrSU.align2015-04-17 18:54 90KPSIBLAST alignment in FASTA format
[TXT]jp_xriPrSU.als2015-04-17 18:54 2.6KAlscript command file for PS/PDF output
[ ]jp_xriPrSU.blast.gz2015-04-17 18:53 1.8MCompressed PSIBLAST output file
[TXT]jp_xriPrSU.coils.csv2015-04-17 18:54 816 COILS output in CSV format
[ ]jp_xriPrSU.coilseq.lupas_142015-04-17 18:54 5.5KCOILS output, window length 14
[ ]jp_xriPrSU.coilseq.lupas_212015-04-17 18:54 5.5KCOILS output, window length 21
[ ]jp_xriPrSU.coilseq.lupas_282015-04-17 18:54 5.5KCOILS output, window length 28
[ ]jp_xriPrSU.concise2015-04-17 18:54 177KPrediction: coiled-coil, solvent, alignment
[ ]jp_xriPrSU.concise.blc2015-04-17 18:54 90KBLC format prediction and alignment data
[ ]jp_xriPrSU.concise.fasta2015-04-17 18:54 91KPrediction: coiled-coil, solvent, alignment
[ ]jp_xriPrSU.concise.pdf2015-04-17 18:54 590KPDF prediction and alignment data
[ ]jp_xriPrSU.concise.ps2015-04-17 18:54 11MPrediction: coiled-coil, solvent, alignment
[ ]jp_xriPrSU.fasta2015-04-17 18:16 145 Input query sequence in FASTA format
[ ]jp_xriPrSU.full_MSA.fasta2015-04-17 18:54 3.5MFull MSA before JPred filters in FASTA
[TXT]jp_xriPrSU.full_MSA.fasta.noGaps.html2015-04-17 18:55 1.2MFull MSA before JPred filters in FASTA
[TXT]jp_xriPrSU.full_MSA.fasta.withGaps.html2015-04-17 18:55 14MFull MSA before JPred filters in FASTA
[ ]jp_xriPrSU.hmm2015-04-17 18:54 25KHHMer2 profile of the alignment
[TXT]jp_xriPrSU.html2015-04-17 18:54 221KHTML prediction and alignment data
[ ]jp_xriPrSU.input2015-04-17 17:12 138 Raw input data for analysis
[ ]jp_xriPrSU.jalview2015-04-17 18:54 3.5KJalview annotation file for alignment
[ ]jp_xriPrSU.jnet2015-04-17 18:54 4.8KJnet secondary structure output
[TXT]jp_xriPrSU.profile2015-04-17 18:40 21KPSIBLAST profile from alignment
[ ]jp_xriPrSU.pssm2015-04-17 18:54 28KPSIBLAST PSSM for Jnet
[TXT]jp_xriPrSU.results.html2016-02-15 12:17 63KJPred results page
[TXT]jp_xriPrSU.results_jalview.html2016-02-24 17:17 13KJalview results options
[TXT]jp_xriPrSU.results_jalview_app.html2016-02-24 17:17 16KHTML prediction and alignment data
[ ]jp_xriPrSU.seq2015-04-17 17:12 145 Sequence data file
[TXT]jp_xriPrSU.simple.html2015-04-17 18:54 1.3KBrief HTML: sequence and prediction only
[TXT]jp_xriPrSU.svg.html2015-04-17 18:55 55KJalview SVG summary of results
[ ]jp_xriPrSU.tar.gz2015-04-17 18:55 3.8MArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.