JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 15:50 4.7KJPred server log file
[TXT]README2016-02-15 12:17 2.1KResults file descriptions
[TXT]d1g8ea_.name2015-04-17 15:19 0 Job name flag file
[ ]jp_FTlXSKq.align2015-04-17 15:49 16KPSIBLAST alignment in FASTA format
[TXT]jp_FTlXSKq.als2015-04-17 15:49 2.2KAlscript command file for PS/PDF output
[ ]jp_FTlXSKq.blast.gz2015-04-17 15:49 48KCompressed PSIBLAST output file
[TXT]jp_FTlXSKq.coils.csv2015-04-17 15:49 618 COILS output in CSV format
[ ]jp_FTlXSKq.coilseq.lupas_142015-04-17 15:49 4.1KCOILS output, window length 14
[ ]jp_FTlXSKq.coilseq.lupas_212015-04-17 15:49 4.1KCOILS output, window length 21
[ ]jp_FTlXSKq.coilseq.lupas_282015-04-17 15:49 4.1KCOILS output, window length 28
[ ]jp_FTlXSKq.concise2015-04-17 15:49 34KPrediction: coiled-coil, solvent, alignment
[ ]jp_FTlXSKq.concise.blc2015-04-17 15:49 17KBLC format prediction and alignment data
[ ]jp_FTlXSKq.concise.fasta2015-04-17 15:49 17KPrediction: coiled-coil, solvent, alignment
[ ]jp_FTlXSKq.concise.pdf2015-04-17 15:49 112KPDF prediction and alignment data
[ ]jp_FTlXSKq.concise.ps2015-04-17 15:49 2.0MPrediction: coiled-coil, solvent, alignment
[ ]jp_FTlXSKq.fasta2015-04-17 15:19 112 Input query sequence in FASTA format
[ ]jp_FTlXSKq.full_MSA.fasta2015-04-17 15:49 44KFull MSA before JPred filters in FASTA
[TXT]jp_FTlXSKq.full_MSA.fasta.noGaps.html2015-04-17 15:49 61KFull MSA before JPred filters in FASTA
[TXT]jp_FTlXSKq.full_MSA.fasta.withGaps.html2015-04-17 15:49 196KFull MSA before JPred filters in FASTA
[ ]jp_FTlXSKq.hmm2015-04-17 15:49 18KHHMer2 profile of the alignment
[TXT]jp_FTlXSKq.html2015-04-17 15:49 55KHTML prediction and alignment data
[ ]jp_FTlXSKq.input2015-04-17 15:19 105 Raw input data for analysis
[ ]jp_FTlXSKq.jalview2015-04-17 15:49 2.8KJalview annotation file for alignment
[ ]jp_FTlXSKq.jnet2015-04-17 15:49 3.7KJnet secondary structure output
[TXT]jp_FTlXSKq.profile2015-04-17 15:32 16KPSIBLAST profile from alignment
[ ]jp_FTlXSKq.pssm2015-04-17 15:49 21KPSIBLAST PSSM for Jnet
[TXT]jp_FTlXSKq.results.html2016-02-15 12:17 50KJPred results page
[TXT]jp_FTlXSKq.results_jalview.html2016-02-24 17:17 13KJalview results options
[TXT]jp_FTlXSKq.results_jalview_app.html2016-02-24 17:17 16KHTML prediction and alignment data
[ ]jp_FTlXSKq.seq2015-04-17 15:19 112 Sequence data file
[TXT]jp_FTlXSKq.simple.html2015-04-17 15:49 1.2KBrief HTML: sequence and prediction only
[TXT]jp_FTlXSKq.svg.html2015-04-17 15:49 42KJalview SVG summary of results
[ ]jp_FTlXSKq.tar.gz2015-04-17 15:50 244KArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.