JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 19:21 4.7KJPred server log file
[TXT]README2016-02-15 12:17 2.1KResults file descriptions
[TXT]d1g8qa_.name2015-04-17 17:48 0 Job name flag file
[ ]jp_DwqDdZ2.align2015-04-17 19:21 18KPSIBLAST alignment in FASTA format
[TXT]jp_DwqDdZ2.als2015-04-17 19:21 1.6KAlscript command file for PS/PDF output
[ ]jp_DwqDdZ2.blast.gz2015-04-17 19:21 58KCompressed PSIBLAST output file
[TXT]jp_DwqDdZ2.coils.csv2015-04-17 19:21 570 COILS output in CSV format
[ ]jp_DwqDdZ2.coilseq.lupas_142015-04-17 19:21 3.8KCOILS output, window length 14
[ ]jp_DwqDdZ2.coilseq.lupas_212015-04-17 19:21 3.8KCOILS output, window length 21
[ ]jp_DwqDdZ2.coilseq.lupas_282015-04-17 19:21 3.8KCOILS output, window length 28
[ ]jp_DwqDdZ2.concise2015-04-17 19:21 38KPrediction: coiled-coil, solvent, alignment
[ ]jp_DwqDdZ2.concise.blc2015-04-17 19:21 19KBLC format prediction and alignment data
[ ]jp_DwqDdZ2.concise.fasta2015-04-17 19:21 19KPrediction: coiled-coil, solvent, alignment
[ ]jp_DwqDdZ2.concise.pdf2015-04-17 19:21 113KPDF prediction and alignment data
[ ]jp_DwqDdZ2.concise.ps2015-04-17 19:21 2.1MPrediction: coiled-coil, solvent, alignment
[ ]jp_DwqDdZ2.fasta2015-04-17 19:15 104 Input query sequence in FASTA format
[ ]jp_DwqDdZ2.full_MSA.fasta2015-04-17 19:21 90KFull MSA before JPred filters in FASTA
[TXT]jp_DwqDdZ2.full_MSA.fasta.noGaps.html2015-04-17 19:21 71KFull MSA before JPred filters in FASTA
[TXT]jp_DwqDdZ2.full_MSA.fasta.withGaps.html2015-04-17 19:21 360KFull MSA before JPred filters in FASTA
[ ]jp_DwqDdZ2.hmm2015-04-17 19:21 17KHHMer2 profile of the alignment
[TXT]jp_DwqDdZ2.html2015-04-17 19:21 59KHTML prediction and alignment data
[ ]jp_DwqDdZ2.input2015-04-17 17:48 97 Raw input data for analysis
[ ]jp_DwqDdZ2.jalview2015-04-17 19:21 2.6KJalview annotation file for alignment
[ ]jp_DwqDdZ2.jnet2015-04-17 19:21 3.4KJnet secondary structure output
[TXT]jp_DwqDdZ2.profile2015-04-17 19:20 15KPSIBLAST profile from alignment
[ ]jp_DwqDdZ2.pssm2015-04-17 19:21 19KPSIBLAST PSSM for Jnet
[TXT]jp_DwqDdZ2.results.html2016-02-15 12:17 44KJPred results page
[TXT]jp_DwqDdZ2.results_jalview.html2016-02-24 17:17 13KJalview results options
[TXT]jp_DwqDdZ2.results_jalview_app.html2016-02-24 17:17 16KHTML prediction and alignment data
[ ]jp_DwqDdZ2.seq2015-04-17 17:48 104 Sequence data file
[TXT]jp_DwqDdZ2.simple.html2015-04-17 19:21 1.1KBrief HTML: sequence and prediction only
[TXT]jp_DwqDdZ2.svg.html2015-04-17 19:21 36KJalview SVG summary of results
[ ]jp_DwqDdZ2.tar.gz2015-04-17 19:21 260KArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.