JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 15:29 4.7KJPred server log file
[TXT]README2016-02-15 12:17 2.1KResults file descriptions
[TXT]d1gp0a_.name2015-04-17 15:20 0 Job name flag file
[ ]jp_7Dz0Ph4.align2015-04-17 15:28 164KPSIBLAST alignment in FASTA format
[TXT]jp_7Dz0Ph4.als2015-04-17 15:28 3.0KAlscript command file for PS/PDF output
[ ]jp_7Dz0Ph4.blast.gz2015-04-17 15:27 1.8MCompressed PSIBLAST output file
[TXT]jp_7Dz0Ph4.coils.csv2015-04-17 15:28 828 COILS output in CSV format
[ ]jp_7Dz0Ph4.coilseq.lupas_142015-04-17 15:28 5.6KCOILS output, window length 14
[ ]jp_7Dz0Ph4.coilseq.lupas_212015-04-17 15:28 5.6KCOILS output, window length 21
[ ]jp_7Dz0Ph4.coilseq.lupas_282015-04-17 15:28 5.6KCOILS output, window length 28
[ ]jp_7Dz0Ph4.concise2015-04-17 15:28 319KPrediction: coiled-coil, solvent, alignment
[ ]jp_7Dz0Ph4.concise.blc2015-04-17 15:28 164KBLC format prediction and alignment data
[ ]jp_7Dz0Ph4.concise.fasta2015-04-17 15:28 168KPrediction: coiled-coil, solvent, alignment
[ ]jp_7Dz0Ph4.concise.pdf2015-04-17 15:29 865KPDF prediction and alignment data
[ ]jp_7Dz0Ph4.concise.ps2015-04-17 15:29 18MPrediction: coiled-coil, solvent, alignment
[ ]jp_7Dz0Ph4.fasta2015-04-17 15:20 147 Input query sequence in FASTA format
[ ]jp_7Dz0Ph4.full_MSA.fasta2015-04-17 15:28 5.5MFull MSA before JPred filters in FASTA
[TXT]jp_7Dz0Ph4.full_MSA.fasta.noGaps.html2015-04-17 15:29 678KFull MSA before JPred filters in FASTA
[TXT]jp_7Dz0Ph4.full_MSA.fasta.withGaps.html2015-04-17 15:29 13MFull MSA before JPred filters in FASTA
[ ]jp_7Dz0Ph4.hmm2015-04-17 15:28 25KHHMer2 profile of the alignment
[TXT]jp_7Dz0Ph4.html2015-04-17 15:28 386KHTML prediction and alignment data
[ ]jp_7Dz0Ph4.input2015-04-17 15:20 140 Raw input data for analysis
[ ]jp_7Dz0Ph4.jalview2015-04-17 15:28 3.5KJalview annotation file for alignment
[ ]jp_7Dz0Ph4.jnet2015-04-17 15:28 4.9KJnet secondary structure output
[TXT]jp_7Dz0Ph4.profile2015-04-17 15:24 22KPSIBLAST profile from alignment
[ ]jp_7Dz0Ph4.pssm2015-04-17 15:28 29KPSIBLAST PSSM for Jnet
[TXT]jp_7Dz0Ph4.results.html2016-02-15 12:17 62KJPred results page
[TXT]jp_7Dz0Ph4.results_jalview.html2016-02-24 17:17 13KJalview results options
[TXT]jp_7Dz0Ph4.results_jalview_app.html2016-02-24 17:17 16KHTML prediction and alignment data
[ ]jp_7Dz0Ph4.seq2015-04-17 15:20 147 Sequence data file
[TXT]jp_7Dz0Ph4.simple.html2015-04-17 15:28 1.4KBrief HTML: sequence and prediction only
[TXT]jp_7Dz0Ph4.svg.html2015-04-17 15:29 54KJalview SVG summary of results
[ ]jp_7Dz0Ph4.tar.gz2015-04-17 15:29 4.0MArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.