JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

Home
REST API
About
F.A.Q.
Help & Tutorials
Monitoring
Contact
Publications
 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 21:19 4.7KJPred server log file
[TXT]README2016-02-15 12:17 2.1KResults file descriptions
[TXT]d1gs9a_.name2015-04-17 19:00 0 Job name flag file
[ ]jp_TrVHj99.align2015-04-17 21:18 153KPSIBLAST alignment in FASTA format
[TXT]jp_TrVHj99.als2015-04-17 21:18 1.6KAlscript command file for PS/PDF output
[ ]jp_TrVHj99.blast.gz2015-04-17 21:18 652KCompressed PSIBLAST output file
[TXT]jp_TrVHj99.coils.csv2015-04-17 21:18 894 COILS output in CSV format
[ ]jp_TrVHj99.coilseq.lupas_142015-04-17 21:18 6.0KCOILS output, window length 14
[ ]jp_TrVHj99.coilseq.lupas_212015-04-17 21:18 6.0KCOILS output, window length 21
[ ]jp_TrVHj99.coilseq.lupas_282015-04-17 21:18 6.0KCOILS output, window length 28
[ ]jp_TrVHj99.concise2015-04-17 21:18 299KPrediction: coiled-coil, solvent, alignment
[ ]jp_TrVHj99.concise.blc2015-04-17 21:18 153KBLC format prediction and alignment data
[ ]jp_TrVHj99.concise.fasta2015-04-17 21:18 158KPrediction: coiled-coil, solvent, alignment
[ ]jp_TrVHj99.concise.pdf2015-04-17 21:18 866KPDF prediction and alignment data
[ ]jp_TrVHj99.concise.ps2015-04-17 21:18 17MPrediction: coiled-coil, solvent, alignment
[ ]jp_TrVHj99.fasta2015-04-17 21:13 159 Input query sequence in FASTA format
[ ]jp_TrVHj99.full_MSA.fasta2015-04-17 21:18 2.4MFull MSA before JPred filters in FASTA
[TXT]jp_TrVHj99.full_MSA.fasta.noGaps.html2015-04-17 21:18 314KFull MSA before JPred filters in FASTA
[TXT]jp_TrVHj99.full_MSA.fasta.withGaps.html2015-04-17 21:18 5.3MFull MSA before JPred filters in FASTA
[ ]jp_TrVHj99.hmm2015-04-17 21:18 27KHHMer2 profile of the alignment
[TXT]jp_TrVHj99.html2015-04-17 21:18 356KHTML prediction and alignment data
[ ]jp_TrVHj99.input2015-04-17 19:00 151 Raw input data for analysis
[ ]jp_TrVHj99.jalview2015-04-17 21:18 3.9KJalview annotation file for alignment
[ ]jp_TrVHj99.jnet2015-04-17 21:18 5.3KJnet secondary structure output
[TXT]jp_TrVHj99.profile2015-04-17 21:17 23KPSIBLAST profile from alignment
[ ]jp_TrVHj99.pssm2015-04-17 21:18 31KPSIBLAST PSSM for Jnet
[TXT]jp_TrVHj99.results.html2016-02-15 12:17 63KJPred results page
[TXT]jp_TrVHj99.results_jalview.html2016-02-24 17:17 13KJalview results options
[TXT]jp_TrVHj99.results_jalview_app.html2016-02-24 17:17 16KHTML prediction and alignment data
[ ]jp_TrVHj99.seq2015-04-17 19:00 159 Sequence data file
[TXT]jp_TrVHj99.simple.html2015-04-17 21:18 1.1KBrief HTML: sequence and prediction only
[TXT]jp_TrVHj99.svg.html2015-04-17 21:19 55KJalview SVG summary of results
[ ]jp_TrVHj99.tar.gz2015-04-17 21:19 1.9MArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.