JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 16:32 4.7KJPred server log file
[TXT]README2016-02-15 12:17 2.1KResults file descriptions
[TXT]d1hp1a1.name2015-04-17 15:20 0 Job name flag file
[ ]jp_1uW0hGv.align2015-04-17 16:31 185KPSIBLAST alignment in FASTA format
[TXT]jp_1uW0hGv.als2015-04-17 16:31 3.0KAlscript command file for PS/PDF output
[ ]jp_1uW0hGv.blast.gz2015-04-17 16:29 8.0MCompressed PSIBLAST output file
[TXT]jp_1uW0hGv.coils.csv2015-04-17 16:31 1.1KCOILS output in CSV format
[ ]jp_1uW0hGv.coilseq.lupas_142015-04-17 16:31 7.9KCOILS output, window length 14
[ ]jp_1uW0hGv.coilseq.lupas_212015-04-17 16:31 7.9KCOILS output, window length 21
[ ]jp_1uW0hGv.coilseq.lupas_282015-04-17 16:31 7.9KCOILS output, window length 28
[ ]jp_1uW0hGv.concise2015-04-17 16:31 365KPrediction: coiled-coil, solvent, alignment
[ ]jp_1uW0hGv.concise.blc2015-04-17 16:31 185KBLC format prediction and alignment data
[ ]jp_1uW0hGv.concise.fasta2015-04-17 16:31 187KPrediction: coiled-coil, solvent, alignment
[ ]jp_1uW0hGv.concise.pdf2015-04-17 16:31 1.3MPDF prediction and alignment data
[ ]jp_1uW0hGv.concise.ps2015-04-17 16:31 23MPrediction: coiled-coil, solvent, alignment
[ ]jp_1uW0hGv.fasta2015-04-17 15:20 203 Input query sequence in FASTA format
[ ]jp_1uW0hGv.full_MSA.fasta2015-04-17 16:30 17MFull MSA before JPred filters in FASTA
[TXT]jp_1uW0hGv.full_MSA.fasta.noGaps.html2015-04-17 16:32 1.6MFull MSA before JPred filters in FASTA
[TXT]jp_1uW0hGv.full_MSA.fasta.withGaps.html2015-04-17 16:32 39MFull MSA before JPred filters in FASTA
[ ]jp_1uW0hGv.hmm2015-04-17 16:31 35KHHMer2 profile of the alignment
[TXT]jp_1uW0hGv.html2015-04-17 16:31 376KHTML prediction and alignment data
[ ]jp_1uW0hGv.input2015-04-17 15:20 195 Raw input data for analysis
[ ]jp_1uW0hGv.jalview2015-04-17 16:31 4.6KJalview annotation file for alignment
[ ]jp_1uW0hGv.jnet2015-04-17 16:31 6.9KJnet secondary structure output
[TXT]jp_1uW0hGv.profile2015-04-17 16:25 30KPSIBLAST profile from alignment
[ ]jp_1uW0hGv.pssm2015-04-17 16:31 40KPSIBLAST PSSM for Jnet
[TXT]jp_1uW0hGv.results.html2016-02-15 12:17 84KJPred results page
[TXT]jp_1uW0hGv.results_jalview.html2016-02-24 17:17 13KJalview results options
[TXT]jp_1uW0hGv.results_jalview_app.html2016-02-24 17:17 16KHTML prediction and alignment data
[ ]jp_1uW0hGv.seq2015-04-17 15:20 203 Sequence data file
[TXT]jp_1uW0hGv.simple.html2015-04-17 16:31 1.5KBrief HTML: sequence and prediction only
[TXT]jp_1uW0hGv.svg.html2015-04-17 16:32 76KJalview SVG summary of results
[ ]jp_1uW0hGv.tar.gz2015-04-17 16:32 14MArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.