JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 16:48 4.7KJPred server log file
[TXT]README2016-02-15 12:17 2.1KResults file descriptions
[TXT]d1hxra_.name2015-04-17 15:58 0 Job name flag file
[ ]jp_awMvmEQ.align2015-04-17 16:48 19KPSIBLAST alignment in FASTA format
[TXT]jp_awMvmEQ.als2015-04-17 16:48 2.4KAlscript command file for PS/PDF output
[ ]jp_awMvmEQ.blast.gz2015-04-17 16:48 93KCompressed PSIBLAST output file
[TXT]jp_awMvmEQ.coils.csv2015-04-17 16:48 672 COILS output in CSV format
[ ]jp_awMvmEQ.coilseq.lupas_142015-04-17 16:48 4.5KCOILS output, window length 14
[ ]jp_awMvmEQ.coilseq.lupas_212015-04-17 16:48 4.5KCOILS output, window length 21
[ ]jp_awMvmEQ.coilseq.lupas_282015-04-17 16:48 4.5KCOILS output, window length 28
[ ]jp_awMvmEQ.concise2015-04-17 16:48 41KPrediction: coiled-coil, solvent, alignment
[ ]jp_awMvmEQ.concise.blc2015-04-17 16:48 21KBLC format prediction and alignment data
[ ]jp_awMvmEQ.concise.fasta2015-04-17 16:48 20KPrediction: coiled-coil, solvent, alignment
[ ]jp_awMvmEQ.concise.pdf2015-04-17 16:48 128KPDF prediction and alignment data
[ ]jp_awMvmEQ.concise.ps2015-04-17 16:48 2.3MPrediction: coiled-coil, solvent, alignment
[ ]jp_awMvmEQ.fasta2015-04-17 16:16 121 Input query sequence in FASTA format
[ ]jp_awMvmEQ.full_MSA.fasta2015-04-17 16:48 159KFull MSA before JPred filters in FASTA
[TXT]jp_awMvmEQ.full_MSA.fasta.noGaps.html2015-04-17 16:48 53KFull MSA before JPred filters in FASTA
[TXT]jp_awMvmEQ.full_MSA.fasta.withGaps.html2015-04-17 16:48 526KFull MSA before JPred filters in FASTA
[ ]jp_awMvmEQ.hmm2015-04-17 16:48 20KHHMer2 profile of the alignment
[TXT]jp_awMvmEQ.html2015-04-17 16:48 59KHTML prediction and alignment data
[ ]jp_awMvmEQ.input2015-04-17 15:58 114 Raw input data for analysis
[ ]jp_awMvmEQ.jalview2015-04-17 16:48 2.9KJalview annotation file for alignment
[ ]jp_awMvmEQ.jnet2015-04-17 16:48 4.0KJnet secondary structure output
[TXT]jp_awMvmEQ.profile2015-04-17 16:38 17KPSIBLAST profile from alignment
[ ]jp_awMvmEQ.pssm2015-04-17 16:48 23KPSIBLAST PSSM for Jnet
[TXT]jp_awMvmEQ.results.html2016-02-15 12:17 52KJPred results page
[TXT]jp_awMvmEQ.results_jalview.html2016-02-24 17:17 13KJalview results options
[TXT]jp_awMvmEQ.results_jalview_app.html2016-02-24 17:17 16KHTML prediction and alignment data
[ ]jp_awMvmEQ.seq2015-04-17 15:58 121 Sequence data file
[TXT]jp_awMvmEQ.simple.html2015-04-17 16:48 1.3KBrief HTML: sequence and prediction only
[TXT]jp_awMvmEQ.svg.html2015-04-17 16:48 44KJalview SVG summary of results
[ ]jp_awMvmEQ.tar.gz2015-04-17 16:48 334KArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.