JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 19:28 4.7KJPred server log file
[TXT]README2016-02-15 12:17 2.1KResults file descriptions
[TXT]d1hyoa2.name2015-04-17 17:49 0 Job name flag file
[ ]jp_p7xtKyU.align2015-04-17 19:27 271KPSIBLAST alignment in FASTA format
[TXT]jp_p7xtKyU.als2015-04-17 19:27 4.1KAlscript command file for PS/PDF output
[ ]jp_p7xtKyU.blast.gz2015-04-17 19:25 9.0MCompressed PSIBLAST output file
[TXT]jp_p7xtKyU.coils.csv2015-04-17 19:27 1.8KCOILS output in CSV format
[ ]jp_p7xtKyU.coilseq.lupas_142015-04-17 19:27 13KCOILS output, window length 14
[ ]jp_p7xtKyU.coilseq.lupas_212015-04-17 19:27 13KCOILS output, window length 21
[ ]jp_p7xtKyU.coilseq.lupas_282015-04-17 19:27 13KCOILS output, window length 28
[ ]jp_p7xtKyU.concise2015-04-17 19:27 538KPrediction: coiled-coil, solvent, alignment
[ ]jp_p7xtKyU.concise.blc2015-04-17 19:27 271KBLC format prediction and alignment data
[ ]jp_p7xtKyU.concise.fasta2015-04-17 19:27 274KPrediction: coiled-coil, solvent, alignment
[ ]jp_p7xtKyU.concise.pdf2015-04-17 19:27 1.7MPDF prediction and alignment data
[ ]jp_p7xtKyU.concise.ps2015-04-17 19:27 32MPrediction: coiled-coil, solvent, alignment
[ ]jp_p7xtKyU.fasta2015-04-17 19:17 315 Input query sequence in FASTA format
[ ]jp_p7xtKyU.full_MSA.fasta2015-04-17 19:26 21MFull MSA before JPred filters in FASTA
[TXT]jp_p7xtKyU.full_MSA.fasta.noGaps.html2015-04-17 19:28 3.8MFull MSA before JPred filters in FASTA
[TXT]jp_p7xtKyU.full_MSA.fasta.withGaps.html2015-04-17 19:28 77MFull MSA before JPred filters in FASTA
[ ]jp_p7xtKyU.hmm2015-04-17 19:27 56KHHMer2 profile of the alignment
[TXT]jp_p7xtKyU.html2015-04-17 19:27 459KHTML prediction and alignment data
[ ]jp_p7xtKyU.input2015-04-17 17:49 305 Raw input data for analysis
[ ]jp_p7xtKyU.jalview2015-04-17 19:27 6.7KJalview annotation file for alignment
[ ]jp_p7xtKyU.jnet2015-04-17 19:27 11KJnet secondary structure output
[TXT]jp_p7xtKyU.profile2015-04-17 19:24 48KPSIBLAST profile from alignment
[ ]jp_p7xtKyU.pssm2015-04-17 19:27 64KPSIBLAST PSSM for Jnet
[TXT]jp_p7xtKyU.results.html2016-02-15 12:17 126KJPred results page
[TXT]jp_p7xtKyU.results_jalview.html2016-02-24 17:17 13KJalview results options
[TXT]jp_p7xtKyU.results_jalview_app.html2016-02-24 17:17 16KHTML prediction and alignment data
[ ]jp_p7xtKyU.seq2015-04-17 17:49 315 Sequence data file
[TXT]jp_p7xtKyU.simple.html2015-04-17 19:27 1.9KBrief HTML: sequence and prediction only
[TXT]jp_p7xtKyU.svg.html2015-04-17 19:28 118KJalview SVG summary of results
[ ]jp_p7xtKyU.tar.gz2015-04-17 19:28 19MArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.