A Protein Secondary Structure Prediction Server
| Name | Last modified | Size | Description | |
|---|---|---|---|---|
![[TXT]](/icons/text.gif){kind=icon} | LOG | 2015-04-17 18:25 | 4.7K | JPred server log file |
| README | 2016-02-15 12:17 | 2.1K | Results file descriptions |
| d1i71a_.name | 2015-04-17 17:14 | 0 | Job name flag file |
![[ ]](/icons/unknown.gif){kind=icon} | jp_yqtq_YJ.align | 2015-04-17 18:25 | 66K | PSIBLAST alignment in FASTA format |
| jp_yqtq_YJ.als | 2015-04-17 18:25 | 1.7K | Alscript command file for PS/PDF output |
![[ ]](/icons/compressed.gif){kind=icon} | jp_yqtq_YJ.blast.gz | 2015-04-17 18:24 | 1.5M | Compressed PSIBLAST output file |
| jp_yqtq_YJ.coils.csv | 2015-04-17 18:25 | 528 | COILS output in CSV format |
| jp_yqtq_YJ.coilseq.lupas_14 | 2015-04-17 18:25 | 3.5K | COILS output, window length 14 |
| jp_yqtq_YJ.coilseq.lupas_21 | 2015-04-17 18:25 | 3.5K | COILS output, window length 21 |
| jp_yqtq_YJ.coilseq.lupas_28 | 2015-04-17 18:25 | 3.5K | COILS output, window length 28 |
| jp_yqtq_YJ.concise | 2015-04-17 18:25 | 127K | Prediction: coiled-coil, solvent, alignment |
| jp_yqtq_YJ.concise.blc | 2015-04-17 18:25 | 66K | BLC format prediction and alignment data |
| jp_yqtq_YJ.concise.fasta | 2015-04-17 18:25 | 67K | Prediction: coiled-coil, solvent, alignment |
![[ ]](/icons/layout.gif){kind=icon} | jp_yqtq_YJ.concise.pdf | 2015-04-17 18:25 | 363K | PDF prediction and alignment data |
| jp_yqtq_YJ.concise.ps | 2015-04-17 18:25 | 6.8M | Prediction: coiled-coil, solvent, alignment |
| jp_yqtq_YJ.fasta | 2015-04-17 18:19 | 97 | Input query sequence in FASTA format |
| jp_yqtq_YJ.full_MSA.fasta | 2015-04-17 18:25 | 2.6M | Full MSA before JPred filters in FASTA |
| jp_yqtq_YJ.full_MSA.fasta.noGaps.html | 2015-04-17 18:25 | 749K | Full MSA before JPred filters in FASTA |
| jp_yqtq_YJ.full_MSA.fasta.withGaps.html | 2015-04-17 18:25 | 9.1M | Full MSA before JPred filters in FASTA |
| jp_yqtq_YJ.hmm | 2015-04-17 18:25 | 16K | HHMer2 profile of the alignment |
| jp_yqtq_YJ.html | 2015-04-17 18:25 | 197K | HTML prediction and alignment data |
| jp_yqtq_YJ.input | 2015-04-17 17:14 | 90 | Raw input data for analysis |
| jp_yqtq_YJ.jalview | 2015-04-17 18:25 | 2.4K | Jalview annotation file for alignment |
| jp_yqtq_YJ.jnet | 2015-04-17 18:25 | 3.1K | Jnet secondary structure output |
| jp_yqtq_YJ.profile | 2015-04-17 18:22 | 14K | PSIBLAST profile from alignment |
| jp_yqtq_YJ.pssm | 2015-04-17 18:25 | 18K | PSIBLAST PSSM for Jnet |
| jp_yqtq_YJ.results.html | 2016-02-15 12:17 | 41K | JPred results page |
| jp_yqtq_YJ.results_jalview.html | 2016-02-24 17:17 | 13K | Jalview results options |
| jp_yqtq_YJ.results_jalview_app.html | 2016-02-24 17:17 | 16K | HTML prediction and alignment data |
| jp_yqtq_YJ.seq | 2015-04-17 17:14 | 97 | Sequence data file |
| jp_yqtq_YJ.simple.html | 2015-04-17 18:25 | 1.1K | Brief HTML: sequence and prediction only |
![[TXT]](jp_yqtq_YJ.svg.html) | jp_yqtq_YJ.svg.html | 2015-04-17 18:25 | 33K | Jalview SVG summary of results |
| jp_yqtq_YJ.tar.gz | 2015-04-17 18:25 | 2.7M | Archive containing complete results |
