A Protein Secondary Structure Prediction Server
| Name | Last modified | Size | Description | |
|---|---|---|---|---|
![[TXT]](/icons/text.gif){kind=icon} | LOG | 2015-04-17 21:21 | 4.7K | JPred server log file |
| README | 2016-02-15 12:17 | 2.1K | Results file descriptions |
| d1ix9a2.name | 2015-04-17 19:02 | 0 | Job name flag file |
![[ ]](/icons/unknown.gif){kind=icon} | jp_IVBi6BQ.align | 2015-04-17 21:20 | 104K | PSIBLAST alignment in FASTA format |
| jp_IVBi6BQ.als | 2015-04-17 21:20 | 2.3K | Alscript command file for PS/PDF output |
![[ ]](/icons/compressed.gif){kind=icon} | jp_IVBi6BQ.blast.gz | 2015-04-17 21:20 | 3.0M | Compressed PSIBLAST output file |
| jp_IVBi6BQ.coils.csv | 2015-04-17 21:20 | 720 | COILS output in CSV format |
| jp_IVBi6BQ.coilseq.lupas_14 | 2015-04-17 21:20 | 4.8K | COILS output, window length 14 |
| jp_IVBi6BQ.coilseq.lupas_21 | 2015-04-17 21:20 | 4.8K | COILS output, window length 21 |
| jp_IVBi6BQ.coilseq.lupas_28 | 2015-04-17 21:20 | 4.8K | COILS output, window length 28 |
| jp_IVBi6BQ.concise | 2015-04-17 21:20 | 202K | Prediction: coiled-coil, solvent, alignment |
| jp_IVBi6BQ.concise.blc | 2015-04-17 21:20 | 104K | BLC format prediction and alignment data |
| jp_IVBi6BQ.concise.fasta | 2015-04-17 21:20 | 105K | Prediction: coiled-coil, solvent, alignment |
![[ ]](/icons/layout.gif){kind=icon} | jp_IVBi6BQ.concise.pdf | 2015-04-17 21:20 | 616K | PDF prediction and alignment data |
| jp_IVBi6BQ.concise.ps | 2015-04-17 21:20 | 12M | Prediction: coiled-coil, solvent, alignment |
| jp_IVBi6BQ.fasta | 2015-04-17 21:15 | 129 | Input query sequence in FASTA format |
| jp_IVBi6BQ.full_MSA.fasta | 2015-04-17 21:20 | 5.4M | Full MSA before JPred filters in FASTA |
| jp_IVBi6BQ.full_MSA.fasta.noGaps.html | 2015-04-17 21:20 | 1.1M | Full MSA before JPred filters in FASTA |
| jp_IVBi6BQ.full_MSA.fasta.withGaps.html | 2015-04-17 21:20 | 15M | Full MSA before JPred filters in FASTA |
| jp_IVBi6BQ.hmm | 2015-04-17 21:20 | 22K | HHMer2 profile of the alignment |
| jp_IVBi6BQ.html | 2015-04-17 21:20 | 266K | HTML prediction and alignment data |
| jp_IVBi6BQ.input | 2015-04-17 19:02 | 122 | Raw input data for analysis |
| jp_IVBi6BQ.jalview | 2015-04-17 21:20 | 3.1K | Jalview annotation file for alignment |
| jp_IVBi6BQ.jnet | 2015-04-17 21:20 | 4.3K | Jnet secondary structure output |
| jp_IVBi6BQ.profile | 2015-04-17 21:19 | 19K | PSIBLAST profile from alignment |
| jp_IVBi6BQ.pssm | 2015-04-17 21:20 | 25K | PSIBLAST PSSM for Jnet |
| jp_IVBi6BQ.results.html | 2016-02-15 12:17 | 56K | JPred results page |
| jp_IVBi6BQ.results_jalview.html | 2016-02-24 17:17 | 13K | Jalview results options |
| jp_IVBi6BQ.results_jalview_app.html | 2016-02-24 17:17 | 16K | HTML prediction and alignment data |
| jp_IVBi6BQ.seq | 2015-04-17 19:02 | 129 | Sequence data file |
| jp_IVBi6BQ.simple.html | 2015-04-17 21:20 | 1.3K | Brief HTML: sequence and prediction only |
![[TXT]](jp_IVBi6BQ.svg.html) | jp_IVBi6BQ.svg.html | 2015-04-17 21:21 | 48K | Jalview SVG summary of results |
| jp_IVBi6BQ.tar.gz | 2015-04-17 21:21 | 5.0M | Archive containing complete results |
