JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 18:22 4.7KJPred server log file
[TXT]README2016-02-15 12:17 2.1KResults file descriptions
[TXT]d1izma_.name2015-04-17 17:14 0 Job name flag file
[ ]jp_UHhhcAN.align2015-04-17 18:21 61KPSIBLAST alignment in FASTA format
[TXT]jp_UHhhcAN.als2015-04-17 18:21 2.2KAlscript command file for PS/PDF output
[ ]jp_UHhhcAN.blast.gz2015-04-17 18:21 242KCompressed PSIBLAST output file
[TXT]jp_UHhhcAN.coils.csv2015-04-17 18:21 1.0KCOILS output in CSV format
[ ]jp_UHhhcAN.coilseq.lupas_142015-04-17 18:21 7.1KCOILS output, window length 14
[ ]jp_UHhhcAN.coilseq.lupas_212015-04-17 18:21 7.1KCOILS output, window length 21
[ ]jp_UHhhcAN.coilseq.lupas_282015-04-17 18:21 7.1KCOILS output, window length 28
[ ]jp_UHhhcAN.concise2015-04-17 18:21 124KPrediction: coiled-coil, solvent, alignment
[ ]jp_UHhhcAN.concise.blc2015-04-17 18:21 63KBLC format prediction and alignment data
[ ]jp_UHhhcAN.concise.fasta2015-04-17 18:21 63KPrediction: coiled-coil, solvent, alignment
[ ]jp_UHhhcAN.concise.pdf2015-04-17 18:21 445KPDF prediction and alignment data
[ ]jp_UHhhcAN.concise.ps2015-04-17 18:21 7.6MPrediction: coiled-coil, solvent, alignment
[ ]jp_UHhhcAN.fasta2015-04-17 18:19 185 Input query sequence in FASTA format
[ ]jp_UHhhcAN.full_MSA.fasta2015-04-17 18:21 233KFull MSA before JPred filters in FASTA
[TXT]jp_UHhhcAN.full_MSA.fasta.noGaps.html2015-04-17 18:21 153KFull MSA before JPred filters in FASTA
[TXT]jp_UHhhcAN.full_MSA.fasta.withGaps.html2015-04-17 18:21 1.3MFull MSA before JPred filters in FASTA
[ ]jp_UHhhcAN.hmm2015-04-17 18:21 32KHHMer2 profile of the alignment
[TXT]jp_UHhhcAN.html2015-04-17 18:21 143KHTML prediction and alignment data
[ ]jp_UHhhcAN.input2015-04-17 17:14 177 Raw input data for analysis
[ ]jp_UHhhcAN.jalview2015-04-17 18:21 4.3KJalview annotation file for alignment
[ ]jp_UHhhcAN.jnet2015-04-17 18:21 6.3KJnet secondary structure output
[TXT]jp_UHhhcAN.profile2015-04-17 18:20 27KPSIBLAST profile from alignment
[ ]jp_UHhhcAN.pssm2015-04-17 18:21 37KPSIBLAST PSSM for Jnet
[TXT]jp_UHhhcAN.results.html2016-02-15 12:17 76KJPred results page
[TXT]jp_UHhhcAN.results_jalview.html2016-02-24 17:17 13KJalview results options
[TXT]jp_UHhhcAN.results_jalview_app.html2016-02-24 17:17 16KHTML prediction and alignment data
[ ]jp_UHhhcAN.seq2015-04-17 17:14 185 Sequence data file
[TXT]jp_UHhhcAN.simple.html2015-04-17 18:21 1.4KBrief HTML: sequence and prediction only
[TXT]jp_UHhhcAN.svg.html2015-04-17 18:22 67KJalview SVG summary of results
[ ]jp_UHhhcAN.tar.gz2015-04-17 18:22 1.0MArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.