JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 16:22 4.7KJPred server log file
[TXT]README2016-02-15 12:17 2.1KResults file descriptions
[TXT]d1j0pa_.name2015-04-17 15:58 0 Job name flag file
[ ]jp_xzp6mqU.align2015-04-17 16:21 36KPSIBLAST alignment in FASTA format
[TXT]jp_xzp6mqU.als2015-04-17 16:21 1.7KAlscript command file for PS/PDF output
[ ]jp_xzp6mqU.blast.gz2015-04-17 16:21 84KCompressed PSIBLAST output file
[TXT]jp_xzp6mqU.coils.csv2015-04-17 16:21 678 COILS output in CSV format
[ ]jp_xzp6mqU.coilseq.lupas_142015-04-17 16:21 4.5KCOILS output, window length 14
[ ]jp_xzp6mqU.coilseq.lupas_212015-04-17 16:21 4.5KCOILS output, window length 21
[ ]jp_xzp6mqU.coilseq.lupas_282015-04-17 16:21 4.5KCOILS output, window length 28
[ ]jp_xzp6mqU.concise2015-04-17 16:21 73KPrediction: coiled-coil, solvent, alignment
[ ]jp_xzp6mqU.concise.blc2015-04-17 16:21 37KBLC format prediction and alignment data
[ ]jp_xzp6mqU.concise.fasta2015-04-17 16:21 37KPrediction: coiled-coil, solvent, alignment
[ ]jp_xzp6mqU.concise.pdf2015-04-17 16:21 201KPDF prediction and alignment data
[ ]jp_xzp6mqU.concise.ps2015-04-17 16:21 3.9MPrediction: coiled-coil, solvent, alignment
[ ]jp_xzp6mqU.fasta2015-04-17 16:17 122 Input query sequence in FASTA format
[ ]jp_xzp6mqU.full_MSA.fasta2015-04-17 16:21 228KFull MSA before JPred filters in FASTA
[TXT]jp_xzp6mqU.full_MSA.fasta.noGaps.html2015-04-17 16:21 80KFull MSA before JPred filters in FASTA
[TXT]jp_xzp6mqU.full_MSA.fasta.withGaps.html2015-04-17 16:21 872KFull MSA before JPred filters in FASTA
[ ]jp_xzp6mqU.hmm2015-04-17 16:21 20KHHMer2 profile of the alignment
[TXT]jp_xzp6mqU.html2015-04-17 16:21 99KHTML prediction and alignment data
[ ]jp_xzp6mqU.input2015-04-17 15:58 115 Raw input data for analysis
[ ]jp_xzp6mqU.jalview2015-04-17 16:21 2.9KJalview annotation file for alignment
[ ]jp_xzp6mqU.jnet2015-04-17 16:21 4.0KJnet secondary structure output
[TXT]jp_xzp6mqU.profile2015-04-17 16:19 18KPSIBLAST profile from alignment
[ ]jp_xzp6mqU.pssm2015-04-17 16:21 23KPSIBLAST PSSM for Jnet
[TXT]jp_xzp6mqU.results.html2016-02-15 12:17 51KJPred results page
[TXT]jp_xzp6mqU.results_jalview.html2016-02-24 17:17 13KJalview results options
[TXT]jp_xzp6mqU.results_jalview_app.html2016-02-24 17:17 16KHTML prediction and alignment data
[ ]jp_xzp6mqU.seq2015-04-17 15:58 122 Sequence data file
[TXT]jp_xzp6mqU.simple.html2015-04-17 16:21 1.2KBrief HTML: sequence and prediction only
[TXT]jp_xzp6mqU.svg.html2015-04-17 16:22 43KJalview SVG summary of results
[ ]jp_xzp6mqU.tar.gz2015-04-17 16:22 448KArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.