JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 21:18 4.7KJPred server log file
[TXT]README2016-02-15 12:17 2.1KResults file descriptions
[TXT]d1jb0l_.name2015-04-17 19:02 0 Job name flag file
[ ]jp_UO9SJhg.align2015-04-17 21:18 12KPSIBLAST alignment in FASTA format
[TXT]jp_UO9SJhg.als2015-04-17 21:18 2.0KAlscript command file for PS/PDF output
[ ]jp_UO9SJhg.blast.gz2015-04-17 21:18 36KCompressed PSIBLAST output file
[TXT]jp_UO9SJhg.coils.csv2015-04-17 21:18 936 COILS output in CSV format
[ ]jp_UO9SJhg.coilseq.lupas_142015-04-17 21:18 6.3KCOILS output, window length 14
[ ]jp_UO9SJhg.coilseq.lupas_212015-04-17 21:18 6.3KCOILS output, window length 21
[ ]jp_UO9SJhg.coilseq.lupas_282015-04-17 21:18 6.3KCOILS output, window length 28
[ ]jp_UO9SJhg.concise2015-04-17 21:18 30KPrediction: coiled-coil, solvent, alignment
[ ]jp_UO9SJhg.concise.blc2015-04-17 21:18 14KBLC format prediction and alignment data
[ ]jp_UO9SJhg.concise.fasta2015-04-17 21:18 14KPrediction: coiled-coil, solvent, alignment
[ ]jp_UO9SJhg.concise.pdf2015-04-17 21:18 93KPDF prediction and alignment data
[ ]jp_UO9SJhg.concise.ps2015-04-17 21:18 1.7MPrediction: coiled-coil, solvent, alignment
[ ]jp_UO9SJhg.fasta2015-04-17 21:16 166 Input query sequence in FASTA format
[ ]jp_UO9SJhg.full_MSA.fasta2015-04-17 21:18 63KFull MSA before JPred filters in FASTA
[TXT]jp_UO9SJhg.full_MSA.fasta.noGaps.html2015-04-17 21:18 61KFull MSA before JPred filters in FASTA
[TXT]jp_UO9SJhg.full_MSA.fasta.withGaps.html2015-04-17 21:18 187KFull MSA before JPred filters in FASTA
[ ]jp_UO9SJhg.hmm2015-04-17 21:18 28KHHMer2 profile of the alignment
[TXT]jp_UO9SJhg.html2015-04-17 21:18 40KHTML prediction and alignment data
[ ]jp_UO9SJhg.input2015-04-17 19:02 158 Raw input data for analysis
[ ]jp_UO9SJhg.jalview2015-04-17 21:18 3.8KJalview annotation file for alignment
[ ]jp_UO9SJhg.jnet2015-04-17 21:18 5.6KJnet secondary structure output
[TXT]jp_UO9SJhg.profile2015-04-17 21:17 24KPSIBLAST profile from alignment
[ ]jp_UO9SJhg.pssm2015-04-17 21:18 32KPSIBLAST PSSM for Jnet
[TXT]jp_UO9SJhg.results.html2016-02-15 12:17 68KJPred results page
[TXT]jp_UO9SJhg.results_jalview.html2016-02-24 17:17 13KJalview results options
[TXT]jp_UO9SJhg.results_jalview_app.html2016-02-24 17:17 16KHTML prediction and alignment data
[ ]jp_UO9SJhg.seq2015-04-17 19:02 166 Sequence data file
[TXT]jp_UO9SJhg.simple.html2015-04-17 21:18 1.3KBrief HTML: sequence and prediction only
[TXT]jp_UO9SJhg.svg.html2015-04-17 21:18 60KJalview SVG summary of results
[ ]jp_UO9SJhg.tar.gz2015-04-17 21:18 205KArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.