JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 17:22 4.7KJPred server log file
[TXT]README2016-02-15 12:17 2.1KResults file descriptions
[TXT]d1jnra1.name2015-04-17 16:36 0 Job name flag file
[ ]jp_bPQK0Le.align2015-04-17 17:21 140KPSIBLAST alignment in FASTA format
[TXT]jp_bPQK0Le.als2015-04-17 17:21 2.2KAlscript command file for PS/PDF output
[ ]jp_bPQK0Le.blast.gz2015-04-17 17:20 2.0MCompressed PSIBLAST output file
[TXT]jp_bPQK0Le.coils.csv2015-04-17 17:21 876 COILS output in CSV format
[ ]jp_bPQK0Le.coilseq.lupas_142015-04-17 17:21 5.9KCOILS output, window length 14
[ ]jp_bPQK0Le.coilseq.lupas_212015-04-17 17:21 5.9KCOILS output, window length 21
[ ]jp_bPQK0Le.coilseq.lupas_282015-04-17 17:21 5.9KCOILS output, window length 28
[ ]jp_bPQK0Le.concise2015-04-17 17:21 274KPrediction: coiled-coil, solvent, alignment
[ ]jp_bPQK0Le.concise.blc2015-04-17 17:21 140KBLC format prediction and alignment data
[ ]jp_bPQK0Le.concise.fasta2015-04-17 17:21 142KPrediction: coiled-coil, solvent, alignment
[ ]jp_bPQK0Le.concise.pdf2015-04-17 17:21 867KPDF prediction and alignment data
[ ]jp_bPQK0Le.concise.ps2015-04-17 17:21 16MPrediction: coiled-coil, solvent, alignment
[ ]jp_bPQK0Le.fasta2015-04-17 17:18 155 Input query sequence in FASTA format
[ ]jp_bPQK0Le.full_MSA.fasta2015-04-17 17:21 5.2MFull MSA before JPred filters in FASTA
[TXT]jp_bPQK0Le.full_MSA.fasta.noGaps.html2015-04-17 17:22 1.1MFull MSA before JPred filters in FASTA
[TXT]jp_bPQK0Le.full_MSA.fasta.withGaps.html2015-04-17 17:22 18MFull MSA before JPred filters in FASTA
[ ]jp_bPQK0Le.hmm2015-04-17 17:21 26KHHMer2 profile of the alignment
[TXT]jp_bPQK0Le.html2015-04-17 17:21 327KHTML prediction and alignment data
[ ]jp_bPQK0Le.input2015-04-17 16:36 148 Raw input data for analysis
[ ]jp_bPQK0Le.jalview2015-04-17 17:21 3.7KJalview annotation file for alignment
[ ]jp_bPQK0Le.jnet2015-04-17 17:21 5.2KJnet secondary structure output
[TXT]jp_bPQK0Le.profile2015-04-17 17:20 23KPSIBLAST profile from alignment
[ ]jp_bPQK0Le.pssm2015-04-17 17:21 30KPSIBLAST PSSM for Jnet
[TXT]jp_bPQK0Le.results.html2016-02-15 12:17 64KJPred results page
[TXT]jp_bPQK0Le.results_jalview.html2016-02-24 17:17 13KJalview results options
[TXT]jp_bPQK0Le.results_jalview_app.html2016-02-24 17:17 16KHTML prediction and alignment data
[ ]jp_bPQK0Le.seq2015-04-17 16:36 155 Sequence data file
[TXT]jp_bPQK0Le.simple.html2015-04-17 17:21 1.3KBrief HTML: sequence and prediction only
[TXT]jp_bPQK0Le.svg.html2015-04-17 17:22 56KJalview SVG summary of results
[ ]jp_bPQK0Le.tar.gz2015-04-17 17:22 4.8MArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.