A Protein Secondary Structure Prediction Server
| Name | Last modified | Size | Description | |
|---|---|---|---|---|
![[TXT]](/icons/text.gif){kind=icon} | LOG | 2015-04-17 20:20 | 4.7K | JPred server log file |
| README | 2016-02-15 12:17 | 2.1K | Results file descriptions |
| d1js8a2.name | 2015-04-17 18:25 | 0 | Job name flag file |
![[ ]](/icons/unknown.gif){kind=icon} | jp_iW7yCxf.align | 2015-04-17 20:20 | 19K | PSIBLAST alignment in FASTA format |
| jp_iW7yCxf.als | 2015-04-17 20:20 | 2.2K | Alscript command file for PS/PDF output |
![[ ]](/icons/compressed.gif){kind=icon} | jp_iW7yCxf.blast.gz | 2015-04-17 20:20 | 53K | Compressed PSIBLAST output file |
| jp_iW7yCxf.coils.csv | 2015-04-17 20:20 | 636 | COILS output in CSV format |
| jp_iW7yCxf.coilseq.lupas_14 | 2015-04-17 20:20 | 4.2K | COILS output, window length 14 |
| jp_iW7yCxf.coilseq.lupas_21 | 2015-04-17 20:20 | 4.2K | COILS output, window length 21 |
| jp_iW7yCxf.coilseq.lupas_28 | 2015-04-17 20:20 | 4.2K | COILS output, window length 28 |
| jp_iW7yCxf.concise | 2015-04-17 20:20 | 41K | Prediction: coiled-coil, solvent, alignment |
| jp_iW7yCxf.concise.blc | 2015-04-17 20:20 | 21K | BLC format prediction and alignment data |
| jp_iW7yCxf.concise.fasta | 2015-04-17 20:20 | 21K | Prediction: coiled-coil, solvent, alignment |
![[ ]](/icons/layout.gif){kind=icon} | jp_iW7yCxf.concise.pdf | 2015-04-17 20:20 | 116K | PDF prediction and alignment data |
| jp_iW7yCxf.concise.ps | 2015-04-17 20:20 | 2.3M | Prediction: coiled-coil, solvent, alignment |
| jp_iW7yCxf.fasta | 2015-04-17 20:18 | 115 | Input query sequence in FASTA format |
| jp_iW7yCxf.full_MSA.fasta | 2015-04-17 20:20 | 48K | Full MSA before JPred filters in FASTA |
| jp_iW7yCxf.full_MSA.fasta.noGaps.html | 2015-04-17 20:20 | 46K | Full MSA before JPred filters in FASTA |
| jp_iW7yCxf.full_MSA.fasta.withGaps.html | 2015-04-17 20:20 | 209K | Full MSA before JPred filters in FASTA |
| jp_iW7yCxf.hmm | 2015-04-17 20:20 | 19K | HHMer2 profile of the alignment |
| jp_iW7yCxf.html | 2015-04-17 20:20 | 60K | HTML prediction and alignment data |
| jp_iW7yCxf.input | 2015-04-17 18:25 | 108 | Raw input data for analysis |
| jp_iW7yCxf.jalview | 2015-04-17 20:20 | 2.8K | Jalview annotation file for alignment |
| jp_iW7yCxf.jnet | 2015-04-17 20:20 | 3.8K | Jnet secondary structure output |
| jp_iW7yCxf.profile | 2015-04-17 20:20 | 16K | PSIBLAST profile from alignment |
| jp_iW7yCxf.pssm | 2015-04-17 20:20 | 22K | PSIBLAST PSSM for Jnet |
| jp_iW7yCxf.results.html | 2016-02-15 12:17 | 50K | JPred results page |
| jp_iW7yCxf.results_jalview.html | 2016-02-24 17:17 | 13K | Jalview results options |
| jp_iW7yCxf.results_jalview_app.html | 2016-02-24 17:17 | 16K | HTML prediction and alignment data |
| jp_iW7yCxf.seq | 2015-04-17 18:25 | 115 | Sequence data file |
| jp_iW7yCxf.simple.html | 2015-04-17 20:20 | 1.3K | Brief HTML: sequence and prediction only |
![[TXT]](jp_iW7yCxf.svg.html) | jp_iW7yCxf.svg.html | 2015-04-17 20:20 | 42K | Jalview SVG summary of results |
| jp_iW7yCxf.tar.gz | 2015-04-17 20:20 | 229K | Archive containing complete results |
