JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 21:32 4.7KJPred server log file
[TXT]README2016-02-15 12:17 2.1KResults file descriptions
[TXT]d1jw9b_.name2015-04-17 19:03 0 Job name flag file
[ ]jp_wLRx0It.align2015-04-17 21:30 222KPSIBLAST alignment in FASTA format
[TXT]jp_wLRx0It.als2015-04-17 21:30 3.9KAlscript command file for PS/PDF output
[ ]jp_wLRx0It.blast.gz2015-04-17 21:26 17MCompressed PSIBLAST output file
[TXT]jp_wLRx0It.coils.csv2015-04-17 21:30 1.4KCOILS output in CSV format
[ ]jp_wLRx0It.coilseq.lupas_142015-04-17 21:30 10KCOILS output, window length 14
[ ]jp_wLRx0It.coilseq.lupas_212015-04-17 21:30 10KCOILS output, window length 21
[ ]jp_wLRx0It.coilseq.lupas_282015-04-17 21:30 10KCOILS output, window length 28
[ ]jp_wLRx0It.concise2015-04-17 21:30 439KPrediction: coiled-coil, solvent, alignment
[ ]jp_wLRx0It.concise.blc2015-04-17 21:30 222KBLC format prediction and alignment data
[ ]jp_wLRx0It.concise.fasta2015-04-17 21:30 224KPrediction: coiled-coil, solvent, alignment
[ ]jp_wLRx0It.concise.pdf2015-04-17 21:31 1.5MPDF prediction and alignment data
[ ]jp_wLRx0It.concise.ps2015-04-17 21:30 27MPrediction: coiled-coil, solvent, alignment
[ ]jp_wLRx0It.fasta2015-04-17 21:17 256 Input query sequence in FASTA format
[ ]jp_wLRx0It.full_MSA.fasta2015-04-17 21:29 29MFull MSA before JPred filters in FASTA
[TXT]jp_wLRx0It.full_MSA.fasta.noGaps.html2015-04-17 21:31 3.2MFull MSA before JPred filters in FASTA
[TXT]jp_wLRx0It.full_MSA.fasta.withGaps.html2015-04-17 21:31 78MFull MSA before JPred filters in FASTA
[ ]jp_wLRx0It.hmm2015-04-17 21:30 45KHHMer2 profile of the alignment
[TXT]jp_wLRx0It.html2015-04-17 21:30 410KHTML prediction and alignment data
[ ]jp_wLRx0It.input2015-04-17 19:03 247 Raw input data for analysis
[ ]jp_wLRx0It.jalview2015-04-17 21:30 5.6KJalview annotation file for alignment
[ ]jp_wLRx0It.jnet2015-04-17 21:30 8.8KJnet secondary structure output
[TXT]jp_wLRx0It.profile2015-04-17 21:25 38KPSIBLAST profile from alignment
[ ]jp_wLRx0It.pssm2015-04-17 21:30 52KPSIBLAST PSSM for Jnet
[TXT]jp_wLRx0It.results.html2016-02-15 12:17 105KJPred results page
[TXT]jp_wLRx0It.results_jalview.html2016-02-24 17:17 13KJalview results options
[TXT]jp_wLRx0It.results_jalview_app.html2016-02-24 17:17 16KHTML prediction and alignment data
[ ]jp_wLRx0It.seq2015-04-17 19:03 256 Sequence data file
[TXT]jp_wLRx0It.simple.html2015-04-17 21:30 1.8KBrief HTML: sequence and prediction only
[TXT]jp_wLRx0It.svg.html2015-04-17 21:32 97KJalview SVG summary of results
[ ]jp_wLRx0It.tar.gz2015-04-17 21:32 26MArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.