JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 16:39 4.7KJPred server log file
[TXT]README2016-02-15 12:17 2.1KResults file descriptions
[TXT]d1jz8a1.name2015-04-17 15:46 0 Job name flag file
[ ]jp_HFI2QnU.align2015-04-17 16:38 148KPSIBLAST alignment in FASTA format
[TXT]jp_HFI2QnU.als2015-04-17 16:38 2.3KAlscript command file for PS/PDF output
[ ]jp_HFI2QnU.blast.gz2015-04-17 16:37 3.6MCompressed PSIBLAST output file
[TXT]jp_HFI2QnU.coils.csv2015-04-17 16:38 714 COILS output in CSV format
[ ]jp_HFI2QnU.coilseq.lupas_142015-04-17 16:38 4.8KCOILS output, window length 14
[ ]jp_HFI2QnU.coilseq.lupas_212015-04-17 16:38 4.8KCOILS output, window length 21
[ ]jp_HFI2QnU.coilseq.lupas_282015-04-17 16:38 4.8KCOILS output, window length 28
[ ]jp_HFI2QnU.concise2015-04-17 16:38 286KPrediction: coiled-coil, solvent, alignment
[ ]jp_HFI2QnU.concise.blc2015-04-17 16:38 147KBLC format prediction and alignment data
[ ]jp_HFI2QnU.concise.fasta2015-04-17 16:38 149KPrediction: coiled-coil, solvent, alignment
[ ]jp_HFI2QnU.concise.pdf2015-04-17 16:39 1.0MPDF prediction and alignment data
[ ]jp_HFI2QnU.concise.ps2015-04-17 16:38 17MPrediction: coiled-coil, solvent, alignment
[ ]jp_HFI2QnU.fasta2015-04-17 15:59 128 Input query sequence in FASTA format
[ ]jp_HFI2QnU.full_MSA.fasta2015-04-17 16:37 10MFull MSA before JPred filters in FASTA
[TXT]jp_HFI2QnU.full_MSA.fasta.noGaps.html2015-04-17 16:39 1.4MFull MSA before JPred filters in FASTA
[TXT]jp_HFI2QnU.full_MSA.fasta.withGaps.html2015-04-17 16:39 26MFull MSA before JPred filters in FASTA
[ ]jp_HFI2QnU.hmm2015-04-17 16:38 21KHHMer2 profile of the alignment
[TXT]jp_HFI2QnU.html2015-04-17 16:38 375KHTML prediction and alignment data
[ ]jp_HFI2QnU.input2015-04-17 15:46 121 Raw input data for analysis
[ ]jp_HFI2QnU.jalview2015-04-17 16:38 3.1KJalview annotation file for alignment
[ ]jp_HFI2QnU.jnet2015-04-17 16:38 4.2KJnet secondary structure output
[TXT]jp_HFI2QnU.profile2015-04-17 16:20 19KPSIBLAST profile from alignment
[ ]jp_HFI2QnU.pssm2015-04-17 16:38 24KPSIBLAST PSSM for Jnet
[TXT]jp_HFI2QnU.results.html2016-02-15 12:17 54KJPred results page
[TXT]jp_HFI2QnU.results_jalview.html2016-02-24 17:17 13KJalview results options
[TXT]jp_HFI2QnU.results_jalview_app.html2016-02-24 17:17 16KHTML prediction and alignment data
[ ]jp_HFI2QnU.seq2015-04-17 15:46 128 Sequence data file
[TXT]jp_HFI2QnU.simple.html2015-04-17 16:38 1.3KBrief HTML: sequence and prediction only
[TXT]jp_HFI2QnU.svg.html2015-04-17 16:39 46KJalview SVG summary of results
[ ]jp_HFI2QnU.tar.gz2015-04-17 16:39 7.7MArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.