JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 17:34 4.7KJPred server log file
[TXT]README2016-02-15 12:17 2.1KResults file descriptions
[TXT]d1k32a2.name2015-04-17 16:36 0 Job name flag file
[ ]jp_emsfoHv.align2015-04-17 17:32 244KPSIBLAST alignment in FASTA format
[TXT]jp_emsfoHv.als2015-04-17 17:32 4.7KAlscript command file for PS/PDF output
[ ]jp_emsfoHv.blast.gz2015-04-17 17:28 29MCompressed PSIBLAST output file
[TXT]jp_emsfoHv.coils.csv2015-04-17 17:32 1.7KCOILS output in CSV format
[ ]jp_emsfoHv.coilseq.lupas_142015-04-17 17:32 12KCOILS output, window length 14
[ ]jp_emsfoHv.coilseq.lupas_212015-04-17 17:32 12KCOILS output, window length 21
[ ]jp_emsfoHv.coilseq.lupas_282015-04-17 17:32 12KCOILS output, window length 28
[ ]jp_emsfoHv.concise2015-04-17 17:32 486KPrediction: coiled-coil, solvent, alignment
[ ]jp_emsfoHv.concise.blc2015-04-17 17:32 245KBLC format prediction and alignment data
[ ]jp_emsfoHv.concise.fasta2015-04-17 17:32 247KPrediction: coiled-coil, solvent, alignment
[ ]jp_emsfoHv.concise.pdf2015-04-17 17:32 1.7MPDF prediction and alignment data
[ ]jp_emsfoHv.concise.ps2015-04-17 17:32 30MPrediction: coiled-coil, solvent, alignment
[ ]jp_emsfoHv.fasta2015-04-17 17:19 297 Input query sequence in FASTA format
[ ]jp_emsfoHv.full_MSA.fasta2015-04-17 17:30 70MFull MSA before JPred filters in FASTA
[TXT]jp_emsfoHv.full_MSA.fasta.noGaps.html2015-04-17 17:34 4.4MFull MSA before JPred filters in FASTA
[TXT]jp_emsfoHv.full_MSA.fasta.withGaps.html2015-04-17 17:34 144MFull MSA before JPred filters in FASTA
[ ]jp_emsfoHv.hmm2015-04-17 17:32 53KHHMer2 profile of the alignment
[TXT]jp_emsfoHv.html2015-04-17 17:32 423KHTML prediction and alignment data
[ ]jp_emsfoHv.input2015-04-17 16:36 288 Raw input data for analysis
[ ]jp_emsfoHv.jalview2015-04-17 17:32 6.3KJalview annotation file for alignment
[ ]jp_emsfoHv.jnet2015-04-17 17:32 10KJnet secondary structure output
[TXT]jp_emsfoHv.profile2015-04-17 17:25 45KPSIBLAST profile from alignment
[ ]jp_emsfoHv.pssm2015-04-17 17:32 60KPSIBLAST PSSM for Jnet
[TXT]jp_emsfoHv.results.html2016-02-15 12:17 119KJPred results page
[TXT]jp_emsfoHv.results_jalview.html2016-02-24 17:17 13KJalview results options
[TXT]jp_emsfoHv.results_jalview_app.html2016-02-24 17:17 16KHTML prediction and alignment data
[ ]jp_emsfoHv.seq2015-04-17 16:36 297 Sequence data file
[TXT]jp_emsfoHv.simple.html2015-04-17 17:32 2.0KBrief HTML: sequence and prediction only
[TXT]jp_emsfoHv.svg.html2015-04-17 17:34 111KJalview SVG summary of results
[ ]jp_emsfoHv.tar.gz2015-04-17 17:34 44MArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.