JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

Home
REST API
About
F.A.Q.
Help & Tutorials
Monitoring
Contact
Publications
 NameLast modifiedSizeDescription
[ ]jp_UjJcuZ8.input2015-04-17 19:03 394 Raw input data for analysis
[ ]jp_UjJcuZ8.seq2015-04-17 19:03 405 Sequence data file
[TXT]d1k3ia3.name2015-04-17 19:03 0 Job name flag file
[ ]jp_UjJcuZ8.fasta2015-04-17 21:18 405 Input query sequence in FASTA format
[TXT]jp_UjJcuZ8.profile2015-04-17 21:25 62KPSIBLAST profile from alignment
[ ]jp_UjJcuZ8.blast.gz2015-04-17 21:30 57MCompressed PSIBLAST output file
[ ]jp_UjJcuZ8.full_MSA.fasta2015-04-17 21:37 246MFull MSA before JPred filters in FASTA
[ ]jp_UjJcuZ8.align2015-04-17 21:41 86KPSIBLAST alignment in FASTA format
[ ]jp_UjJcuZ8.pssm2015-04-17 21:41 83KPSIBLAST PSSM for Jnet
[ ]jp_UjJcuZ8.hmm2015-04-17 21:41 73KHHMer2 profile of the alignment
[ ]jp_UjJcuZ8.jnet2015-04-17 21:41 14KJnet secondary structure output
[ ]jp_UjJcuZ8.coilseq.lupas_212015-04-17 21:41 16KCOILS output, window length 21
[ ]jp_UjJcuZ8.coilseq.lupas_142015-04-17 21:41 16KCOILS output, window length 14
[ ]jp_UjJcuZ8.coilseq.lupas_282015-04-17 21:41 16KCOILS output, window length 28
[TXT]jp_UjJcuZ8.coils.csv2015-04-17 21:41 2.3KCOILS output in CSV format
[ ]jp_UjJcuZ8.concise2015-04-17 21:41 183KPrediction: coiled-coil, solvent, alignment
[TXT]jp_UjJcuZ8.html2015-04-17 21:41 157KHTML prediction and alignment data
[TXT]jp_UjJcuZ8.simple.html2015-04-17 21:41 2.2KBrief HTML: sequence and prediction only
[ ]jp_UjJcuZ8.jalview2015-04-17 21:41 8.3KJalview annotation file for alignment
[ ]jp_UjJcuZ8.concise.fasta2015-04-17 21:41 90KPrediction: coiled-coil, solvent, alignment
[ ]jp_UjJcuZ8.concise.blc2015-04-17 21:41 90KBLC format prediction and alignment data
[TXT]jp_UjJcuZ8.als2015-04-17 21:41 4.8KAlscript command file for PS/PDF output
[ ]jp_UjJcuZ8.concise.ps2015-04-17 21:41 11MPrediction: coiled-coil, solvent, alignment
[ ]jp_UjJcuZ8.concise.pdf2015-04-17 21:41 598KPDF prediction and alignment data
[TXT]jp_UjJcuZ8.full_MSA.fasta.withGaps.html2015-04-17 21:46 538MFull MSA before JPred filters in FASTA
[TXT]jp_UjJcuZ8.full_MSA.fasta.noGaps.html2015-04-17 21:46 16MFull MSA before JPred filters in FASTA
[TXT]jp_UjJcuZ8.svg.html2015-04-17 21:47 149KJalview SVG summary of results
[TXT]LOG2015-04-17 21:47 4.7KJPred server log file
[ ]jp_UjJcuZ8.tar.gz2015-04-17 21:47 96MArchive containing complete results
[TXT]README2016-02-15 12:17 2.1KResults file descriptions
[TXT]jp_UjJcuZ8.results.html2016-02-15 12:17 157KJPred results page
[TXT]jp_UjJcuZ8.results_jalview.html2016-02-24 17:17 13KJalview results options
[TXT]jp_UjJcuZ8.results_jalview_app.html2016-02-24 17:17 16KHTML prediction and alignment data
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.