JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

Home
REST API
About
F.A.Q.
Help & Tutorials
Monitoring
Contact
Publications
 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 16:04 4.7KJPred server log file
[TXT]README2016-02-15 12:17 2.1KResults file descriptions
[TXT]d1k3xa3.name2015-04-17 15:48 0 Job name flag file
[ ]jp_QRDSMR9.align2015-04-17 16:04 51KPSIBLAST alignment in FASTA format
[TXT]jp_QRDSMR9.als2015-04-17 16:04 1.6KAlscript command file for PS/PDF output
[ ]jp_QRDSMR9.blast.gz2015-04-17 16:03 584KCompressed PSIBLAST output file
[TXT]jp_QRDSMR9.coils.csv2015-04-17 16:04 270 COILS output in CSV format
[ ]jp_QRDSMR9.coilseq.lupas_142015-04-17 16:04 1.7KCOILS output, window length 14
[ ]jp_QRDSMR9.coilseq.lupas_212015-04-17 16:04 1.7KCOILS output, window length 21
[ ]jp_QRDSMR9.coilseq.lupas_282015-04-17 16:04 1.7KCOILS output, window length 28
[ ]jp_QRDSMR9.concise2015-04-17 16:04 93KPrediction: coiled-coil, solvent, alignment
[ ]jp_QRDSMR9.concise.blc2015-04-17 16:04 51KBLC format prediction and alignment data
[ ]jp_QRDSMR9.concise.fasta2015-04-17 16:04 51KPrediction: coiled-coil, solvent, alignment
[ ]jp_QRDSMR9.concise.pdf2015-04-17 16:04 247KPDF prediction and alignment data
[ ]jp_QRDSMR9.concise.ps2015-04-17 16:04 4.5MPrediction: coiled-coil, solvent, alignment
[ ]jp_QRDSMR9.fasta2015-04-17 16:01 53 Input query sequence in FASTA format
[ ]jp_QRDSMR9.full_MSA.fasta2015-04-17 16:03 1.1MFull MSA before JPred filters in FASTA
[TXT]jp_QRDSMR9.full_MSA.fasta.noGaps.html2015-04-17 16:04 685KFull MSA before JPred filters in FASTA
[TXT]jp_QRDSMR9.full_MSA.fasta.withGaps.html2015-04-17 16:04 4.2MFull MSA before JPred filters in FASTA
[ ]jp_QRDSMR9.hmm2015-04-17 16:04 7.5KHHMer2 profile of the alignment
[TXT]jp_QRDSMR9.html2015-04-17 16:04 222KHTML prediction and alignment data
[ ]jp_QRDSMR9.input2015-04-17 15:48 47 Raw input data for analysis
[ ]jp_QRDSMR9.jalview2015-04-17 16:04 1.6KJalview annotation file for alignment
[ ]jp_QRDSMR9.jnet2015-04-17 16:04 1.6KJnet secondary structure output
[TXT]jp_QRDSMR9.profile2015-04-17 16:03 6.8KPSIBLAST profile from alignment
[ ]jp_QRDSMR9.pssm2015-04-17 16:04 8.6KPSIBLAST PSSM for Jnet
[TXT]jp_QRDSMR9.results.html2016-02-15 12:17 26KJPred results page
[TXT]jp_QRDSMR9.results_jalview.html2016-02-24 17:17 13KJalview results options
[TXT]jp_QRDSMR9.results_jalview_app.html2016-02-24 17:17 16KHTML prediction and alignment data
[ ]jp_QRDSMR9.seq2015-04-17 15:48 53 Sequence data file
[TXT]jp_QRDSMR9.simple.html2015-04-17 16:04 1.0KBrief HTML: sequence and prediction only
[TXT]jp_QRDSMR9.svg.html2015-04-17 16:04 18KJalview SVG summary of results
[ ]jp_QRDSMR9.tar.gz2015-04-17 16:04 1.3MArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.