JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

Home
REST API
About
F.A.Q.
Help & Tutorials
Monitoring
Contact
Publications
 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 21:21 4.7KJPred server log file
[TXT]README2016-02-15 12:17 2.1KResults file descriptions
[TXT]d1k6ya1.name2015-04-17 19:03 0 Job name flag file
[ ]jp_rzDmWU6.align2015-04-17 21:20 8.0KPSIBLAST alignment in FASTA format
[TXT]jp_rzDmWU6.als2015-04-17 21:20 1.7KAlscript command file for PS/PDF output
[ ]jp_rzDmWU6.blast.gz2015-04-17 21:20 48KCompressed PSIBLAST output file
[TXT]jp_rzDmWU6.coils.csv2015-04-17 21:20 306 COILS output in CSV format
[ ]jp_rzDmWU6.coilseq.lupas_142015-04-17 21:20 1.9KCOILS output, window length 14
[ ]jp_rzDmWU6.coilseq.lupas_212015-04-17 21:20 1.9KCOILS output, window length 21
[ ]jp_rzDmWU6.coilseq.lupas_282015-04-17 21:20 1.9KCOILS output, window length 28
[ ]jp_rzDmWU6.concise2015-04-17 21:20 17KPrediction: coiled-coil, solvent, alignment
[ ]jp_rzDmWU6.concise.blc2015-04-17 21:20 8.7KBLC format prediction and alignment data
[ ]jp_rzDmWU6.concise.fasta2015-04-17 21:20 8.6KPrediction: coiled-coil, solvent, alignment
[ ]jp_rzDmWU6.concise.pdf2015-04-17 21:20 48KPDF prediction and alignment data
[ ]jp_rzDmWU6.concise.ps2015-04-17 21:20 849KPrediction: coiled-coil, solvent, alignment
[ ]jp_rzDmWU6.fasta2015-04-17 21:19 59 Input query sequence in FASTA format
[ ]jp_rzDmWU6.full_MSA.fasta2015-04-17 21:20 41KFull MSA before JPred filters in FASTA
[TXT]jp_rzDmWU6.full_MSA.fasta.noGaps.html2015-04-17 21:20 111KFull MSA before JPred filters in FASTA
[TXT]jp_rzDmWU6.full_MSA.fasta.withGaps.html2015-04-17 21:20 143KFull MSA before JPred filters in FASTA
[ ]jp_rzDmWU6.hmm2015-04-17 21:20 8.6KHHMer2 profile of the alignment
[TXT]jp_rzDmWU6.html2015-04-17 21:20 38KHTML prediction and alignment data
[ ]jp_rzDmWU6.input2015-04-17 19:03 53 Raw input data for analysis
[ ]jp_rzDmWU6.jalview2015-04-17 21:20 1.7KJalview annotation file for alignment
[ ]jp_rzDmWU6.jnet2015-04-17 21:20 1.8KJnet secondary structure output
[TXT]jp_rzDmWU6.profile2015-04-17 21:20 7.8KPSIBLAST profile from alignment
[ ]jp_rzDmWU6.pssm2015-04-17 21:20 9.9KPSIBLAST PSSM for Jnet
[TXT]jp_rzDmWU6.results.html2016-02-15 12:17 30KJPred results page
[TXT]jp_rzDmWU6.results_jalview.html2016-02-24 17:17 13KJalview results options
[TXT]jp_rzDmWU6.results_jalview_app.html2016-02-24 17:17 16KHTML prediction and alignment data
[ ]jp_rzDmWU6.seq2015-04-17 19:03 59 Sequence data file
[TXT]jp_rzDmWU6.simple.html2015-04-17 21:20 1.0KBrief HTML: sequence and prediction only
[TXT]jp_rzDmWU6.svg.html2015-04-17 21:21 22KJalview SVG summary of results
[ ]jp_rzDmWU6.tar.gz2015-04-17 21:21 155KArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.