A Protein Secondary Structure Prediction Server
| Name | Last modified | Size | Description | |
|---|---|---|---|---|
![[TXT]](/icons/text.gif){kind=icon} | LOG | 2015-04-17 20:24 | 4.7K | JPred server log file |
| README | 2016-02-15 12:17 | 2.1K | Results file descriptions |
| d1k8ke_.name | 2015-04-17 18:26 | 0 | Job name flag file |
![[ ]](/icons/unknown.gif){kind=icon} | jp_Xigaqsh.align | 2015-04-17 20:24 | 33K | PSIBLAST alignment in FASTA format |
| jp_Xigaqsh.als | 2015-04-17 20:24 | 2.5K | Alscript command file for PS/PDF output |
![[ ]](/icons/compressed.gif){kind=icon} | jp_Xigaqsh.blast.gz | 2015-04-17 20:24 | 137K | Compressed PSIBLAST output file |
| jp_Xigaqsh.coils.csv | 2015-04-17 20:24 | 1.0K | COILS output in CSV format |
| jp_Xigaqsh.coilseq.lupas_14 | 2015-04-17 20:24 | 7.3K | COILS output, window length 14 |
| jp_Xigaqsh.coilseq.lupas_21 | 2015-04-17 20:24 | 7.3K | COILS output, window length 21 |
| jp_Xigaqsh.coilseq.lupas_28 | 2015-04-17 20:24 | 7.3K | COILS output, window length 28 |
| jp_Xigaqsh.concise | 2015-04-17 20:24 | 71K | Prediction: coiled-coil, solvent, alignment |
| jp_Xigaqsh.concise.blc | 2015-04-17 20:24 | 35K | BLC format prediction and alignment data |
| jp_Xigaqsh.concise.fasta | 2015-04-17 20:24 | 35K | Prediction: coiled-coil, solvent, alignment |
![[ ]](/icons/layout.gif){kind=icon} | jp_Xigaqsh.concise.pdf | 2015-04-17 20:24 | 228K | PDF prediction and alignment data |
| jp_Xigaqsh.concise.ps | 2015-04-17 20:24 | 4.2M | Prediction: coiled-coil, solvent, alignment |
| jp_Xigaqsh.fasta | 2015-04-17 20:19 | 188 | Input query sequence in FASTA format |
| jp_Xigaqsh.full_MSA.fasta | 2015-04-17 20:24 | 207K | Full MSA before JPred filters in FASTA |
| jp_Xigaqsh.full_MSA.fasta.noGaps.html | 2015-04-17 20:24 | 98K | Full MSA before JPred filters in FASTA |
| jp_Xigaqsh.full_MSA.fasta.withGaps.html | 2015-04-17 20:24 | 790K | Full MSA before JPred filters in FASTA |
| jp_Xigaqsh.hmm | 2015-04-17 20:24 | 32K | HHMer2 profile of the alignment |
| jp_Xigaqsh.html | 2015-04-17 20:24 | 84K | HTML prediction and alignment data |
| jp_Xigaqsh.input | 2015-04-17 18:26 | 180 | Raw input data for analysis |
| jp_Xigaqsh.jalview | 2015-04-17 20:24 | 4.3K | Jalview annotation file for alignment |
| jp_Xigaqsh.jnet | 2015-04-17 20:24 | 6.4K | Jnet secondary structure output |
| jp_Xigaqsh.profile | 2015-04-17 20:23 | 28K | PSIBLAST profile from alignment |
| jp_Xigaqsh.pssm | 2015-04-17 20:24 | 37K | PSIBLAST PSSM for Jnet |
| jp_Xigaqsh.results.html | 2016-02-15 12:17 | 77K | JPred results page |
| jp_Xigaqsh.results_jalview.html | 2016-02-24 17:17 | 13K | Jalview results options |
| jp_Xigaqsh.results_jalview_app.html | 2016-02-24 17:17 | 16K | HTML prediction and alignment data |
| jp_Xigaqsh.seq | 2015-04-17 18:26 | 188 | Sequence data file |
| jp_Xigaqsh.simple.html | 2015-04-17 20:24 | 1.4K | Brief HTML: sequence and prediction only |
![[TXT]](jp_Xigaqsh.svg.html) | jp_Xigaqsh.svg.html | 2015-04-17 20:24 | 69K | Jalview SVG summary of results |
| jp_Xigaqsh.tar.gz | 2015-04-17 20:24 | 511K | Archive containing complete results |
