JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]jp_WdWSZsv.als2015-04-17 21:57 3.0KAlscript command file for PS/PDF output
[ ]jp_WdWSZsv.tar.gz2015-04-17 21:57 2.2MArchive containing complete results
[ ]jp_WdWSZsv.concise.blc2015-04-17 21:57 159KBLC format prediction and alignment data
[TXT]jp_WdWSZsv.simple.html2015-04-17 21:57 1.4KBrief HTML: sequence and prediction only
[TXT]jp_WdWSZsv.coils.csv2015-04-17 21:57 804 COILS output in CSV format
[ ]jp_WdWSZsv.coilseq.lupas_142015-04-17 21:57 5.4KCOILS output, window length 14
[ ]jp_WdWSZsv.coilseq.lupas_212015-04-17 21:57 5.4KCOILS output, window length 21
[ ]jp_WdWSZsv.coilseq.lupas_282015-04-17 21:57 5.4KCOILS output, window length 28
[ ]jp_WdWSZsv.blast.gz2015-04-17 21:55 485KCompressed PSIBLAST output file
[ ]jp_WdWSZsv.full_MSA.fasta2015-04-17 21:55 787KFull MSA before JPred filters in FASTA
[TXT]jp_WdWSZsv.full_MSA.fasta.noGaps.html2015-04-17 21:57 419KFull MSA before JPred filters in FASTA
[TXT]jp_WdWSZsv.full_MSA.fasta.withGaps.html2015-04-17 21:57 4.8MFull MSA before JPred filters in FASTA
[ ]jp_WdWSZsv.hmm2015-04-17 21:57 24KHHMer2 profile of the alignment
[TXT]jp_WdWSZsv.html2015-04-17 21:57 382KHTML prediction and alignment data
[TXT]jp_WdWSZsv.results_jalview_app.html2016-02-24 17:17 16KHTML prediction and alignment data
[ ]jp_WdWSZsv.fasta2015-04-17 21:20 143 Input query sequence in FASTA format
[TXT]jp_WdWSZsv.results.html2016-02-15 12:17 63KJPred results page
[TXT]LOG2015-04-17 21:57 4.7KJPred server log file
[TXT]jp_WdWSZsv.svg.html2015-04-17 21:57 55KJalview SVG summary of results
[ ]jp_WdWSZsv.jalview2015-04-17 21:57 3.4KJalview annotation file for alignment
[TXT]jp_WdWSZsv.results_jalview.html2016-02-24 17:17 13KJalview results options
[ ]jp_WdWSZsv.jnet2015-04-17 21:57 4.8KJnet secondary structure output
[TXT]d1ko7a1.name2015-04-17 19:04 0 Job name flag file
[ ]jp_WdWSZsv.concise.pdf2015-04-17 21:57 1.1MPDF prediction and alignment data
[ ]jp_WdWSZsv.pssm2015-04-17 21:57 28KPSIBLAST PSSM for Jnet
[ ]jp_WdWSZsv.align2015-04-17 21:57 159KPSIBLAST alignment in FASTA format
[TXT]jp_WdWSZsv.profile2015-04-17 21:38 21KPSIBLAST profile from alignment
[ ]jp_WdWSZsv.concise2015-04-17 21:57 309KPrediction: coiled-coil, solvent, alignment
[ ]jp_WdWSZsv.concise.fasta2015-04-17 21:57 160KPrediction: coiled-coil, solvent, alignment
[ ]jp_WdWSZsv.concise.ps2015-04-17 21:57 19MPrediction: coiled-coil, solvent, alignment
[ ]jp_WdWSZsv.input2015-04-17 19:04 136 Raw input data for analysis
[TXT]README2016-02-15 12:17 2.1KResults file descriptions
[ ]jp_WdWSZsv.seq2015-04-17 19:04 143 Sequence data file
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.