JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 21:25 4.7KJPred server log file
[TXT]README2016-02-15 12:17 2.1KResults file descriptions
[TXT]d1kqfc_.name2015-04-17 19:04 0 Job name flag file
[ ]jp_NwwF274.align2015-04-17 21:25 67KPSIBLAST alignment in FASTA format
[TXT]jp_NwwF274.als2015-04-17 21:25 2.9KAlscript command file for PS/PDF output
[ ]jp_NwwF274.blast.gz2015-04-17 21:24 239KCompressed PSIBLAST output file
[TXT]jp_NwwF274.coils.csv2015-04-17 21:25 1.3KCOILS output in CSV format
[ ]jp_NwwF274.coilseq.lupas_142015-04-17 21:25 9.1KCOILS output, window length 14
[ ]jp_NwwF274.coilseq.lupas_212015-04-17 21:25 9.1KCOILS output, window length 21
[ ]jp_NwwF274.coilseq.lupas_282015-04-17 21:25 9.1KCOILS output, window length 28
[ ]jp_NwwF274.concise2015-04-17 21:25 139KPrediction: coiled-coil, solvent, alignment
[ ]jp_NwwF274.concise.blc2015-04-17 21:25 70KBLC format prediction and alignment data
[ ]jp_NwwF274.concise.fasta2015-04-17 21:25 70KPrediction: coiled-coil, solvent, alignment
[ ]jp_NwwF274.concise.pdf2015-04-17 21:25 465KPDF prediction and alignment data
[ ]jp_NwwF274.concise.ps2015-04-17 21:25 8.4MPrediction: coiled-coil, solvent, alignment
[ ]jp_NwwF274.fasta2015-04-17 21:20 232 Input query sequence in FASTA format
[ ]jp_NwwF274.full_MSA.fasta2015-04-17 21:25 431KFull MSA before JPred filters in FASTA
[TXT]jp_NwwF274.full_MSA.fasta.noGaps.html2015-04-17 21:25 229KFull MSA before JPred filters in FASTA
[TXT]jp_NwwF274.full_MSA.fasta.withGaps.html2015-04-17 21:25 1.7MFull MSA before JPred filters in FASTA
[ ]jp_NwwF274.hmm2015-04-17 21:25 41KHHMer2 profile of the alignment
[TXT]jp_NwwF274.html2015-04-17 21:25 145KHTML prediction and alignment data
[ ]jp_NwwF274.input2015-04-17 19:04 223 Raw input data for analysis
[ ]jp_NwwF274.jalview2015-04-17 21:25 5.2KJalview annotation file for alignment
[ ]jp_NwwF274.jnet2015-04-17 21:25 7.9KJnet secondary structure output
[TXT]jp_NwwF274.profile2015-04-17 21:23 35KPSIBLAST profile from alignment
[ ]jp_NwwF274.pssm2015-04-17 21:25 46KPSIBLAST PSSM for Jnet
[TXT]jp_NwwF274.results.html2016-02-15 12:17 95KJPred results page
[TXT]jp_NwwF274.results_jalview.html2016-02-24 17:17 13KJalview results options
[TXT]jp_NwwF274.results_jalview_app.html2016-02-24 17:17 16KHTML prediction and alignment data
[ ]jp_NwwF274.seq2015-04-17 19:04 232 Sequence data file
[TXT]jp_NwwF274.simple.html2015-04-17 21:25 1.6KBrief HTML: sequence and prediction only
[TXT]jp_NwwF274.svg.html2015-04-17 21:25 87KJalview SVG summary of results
[ ]jp_NwwF274.tar.gz2015-04-17 21:25 1.0MArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.