JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 16:24 4.7KJPred server log file
[TXT]README2016-02-15 12:17 2.1KResults file descriptions
[TXT]d1kwfa_.name2015-04-17 16:00 0 Job name flag file
[ ]jp_5qXK_In.align2015-04-17 16:23 298KPSIBLAST alignment in FASTA format
[TXT]jp_5qXK_In.als2015-04-17 16:24 4.1KAlscript command file for PS/PDF output
[ ]jp_5qXK_In.blast.gz2015-04-17 16:23 1.7MCompressed PSIBLAST output file
[TXT]jp_5qXK_In.coils.csv2015-04-17 16:23 2.2KCOILS output in CSV format
[ ]jp_5qXK_In.coilseq.lupas_142015-04-17 16:23 15KCOILS output, window length 14
[ ]jp_5qXK_In.coilseq.lupas_212015-04-17 16:23 15KCOILS output, window length 21
[ ]jp_5qXK_In.coilseq.lupas_282015-04-17 16:23 15KCOILS output, window length 28
[ ]jp_5qXK_In.concise2015-04-17 16:23 595KPrediction: coiled-coil, solvent, alignment
[ ]jp_5qXK_In.concise.blc2015-04-17 16:24 299KBLC format prediction and alignment data
[ ]jp_5qXK_In.concise.fasta2015-04-17 16:24 302KPrediction: coiled-coil, solvent, alignment
[ ]jp_5qXK_In.concise.pdf2015-04-17 16:24 2.0MPDF prediction and alignment data
[ ]jp_5qXK_In.concise.ps2015-04-17 16:24 37MPrediction: coiled-coil, solvent, alignment
[ ]jp_5qXK_In.fasta2015-04-17 16:19 381 Input query sequence in FASTA format
[ ]jp_5qXK_In.full_MSA.fasta2015-04-17 16:23 2.7MFull MSA before JPred filters in FASTA
[TXT]jp_5qXK_In.full_MSA.fasta.noGaps.html2015-04-17 16:24 513KFull MSA before JPred filters in FASTA
[TXT]jp_5qXK_In.full_MSA.fasta.withGaps.html2015-04-17 16:24 10MFull MSA before JPred filters in FASTA
[ ]jp_5qXK_In.hmm2015-04-17 16:23 68KHHMer2 profile of the alignment
[TXT]jp_5qXK_In.html2015-04-17 16:23 482KHTML prediction and alignment data
[ ]jp_5qXK_In.input2015-04-17 16:00 370 Raw input data for analysis
[ ]jp_5qXK_In.jalview2015-04-17 16:24 8.1KJalview annotation file for alignment
[ ]jp_5qXK_In.jnet2015-04-17 16:23 13KJnet secondary structure output
[TXT]jp_5qXK_In.profile2015-04-17 16:22 58KPSIBLAST profile from alignment
[ ]jp_5qXK_In.pssm2015-04-17 16:23 78KPSIBLAST PSSM for Jnet
[TXT]jp_5qXK_In.results.html2016-02-15 12:17 151KJPred results page
[TXT]jp_5qXK_In.results_jalview.html2016-02-24 17:17 13KJalview results options
[TXT]jp_5qXK_In.results_jalview_app.html2016-02-24 17:17 16KHTML prediction and alignment data
[ ]jp_5qXK_In.seq2015-04-17 16:00 381 Sequence data file
[TXT]jp_5qXK_In.simple.html2015-04-17 16:23 2.1KBrief HTML: sequence and prediction only
[TXT]jp_5qXK_In.svg.html2015-04-17 16:24 143KJalview SVG summary of results
[ ]jp_5qXK_In.tar.gz2015-04-17 16:24 5.2MArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.