JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 18:24 4.7KJPred server log file
[TXT]README2016-02-15 12:17 2.1KResults file descriptions
[TXT]d1l2pa_.name2015-04-17 17:15 0 Job name flag file
[ ]jp_A9xGTa3.align2015-04-17 18:24 14KPSIBLAST alignment in FASTA format
[TXT]jp_A9xGTa3.als2015-04-17 18:24 1.3KAlscript command file for PS/PDF output
[ ]jp_A9xGTa3.blast.gz2015-04-17 18:24 34KCompressed PSIBLAST output file
[TXT]jp_A9xGTa3.coils.csv2015-04-17 18:24 396 COILS output in CSV format
[ ]jp_A9xGTa3.coilseq.lupas_142015-04-17 18:24 2.6KCOILS output, window length 14
[ ]jp_A9xGTa3.coilseq.lupas_212015-04-17 18:24 2.6KCOILS output, window length 21
[ ]jp_A9xGTa3.coilseq.lupas_282015-04-17 18:24 2.6KCOILS output, window length 28
[ ]jp_A9xGTa3.concise2015-04-17 18:24 29KPrediction: coiled-coil, solvent, alignment
[ ]jp_A9xGTa3.concise.blc2015-04-17 18:24 15KBLC format prediction and alignment data
[ ]jp_A9xGTa3.concise.fasta2015-04-17 18:24 15KPrediction: coiled-coil, solvent, alignment
[ ]jp_A9xGTa3.concise.pdf2015-04-17 18:24 76KPDF prediction and alignment data
[ ]jp_A9xGTa3.concise.ps2015-04-17 18:24 1.5MPrediction: coiled-coil, solvent, alignment
[ ]jp_A9xGTa3.fasta2015-04-17 18:22 74 Input query sequence in FASTA format
[ ]jp_A9xGTa3.full_MSA.fasta2015-04-17 18:24 21KFull MSA before JPred filters in FASTA
[TXT]jp_A9xGTa3.full_MSA.fasta.noGaps.html2015-04-17 18:24 50KFull MSA before JPred filters in FASTA
[TXT]jp_A9xGTa3.full_MSA.fasta.withGaps.html2015-04-17 18:24 50KFull MSA before JPred filters in FASTA
[ ]jp_A9xGTa3.hmm2015-04-17 18:24 11KHHMer2 profile of the alignment
[TXT]jp_A9xGTa3.html2015-04-17 18:24 59KHTML prediction and alignment data
[ ]jp_A9xGTa3.input2015-04-17 17:15 68 Raw input data for analysis
[ ]jp_A9xGTa3.jalview2015-04-17 18:24 2.1KJalview annotation file for alignment
[ ]jp_A9xGTa3.jnet2015-04-17 18:24 2.3KJnet secondary structure output
[TXT]jp_A9xGTa3.profile2015-04-17 18:23 10KPSIBLAST profile from alignment
[ ]jp_A9xGTa3.pssm2015-04-17 18:24 13KPSIBLAST PSSM for Jnet
[TXT]jp_A9xGTa3.results.html2016-02-15 12:17 33KJPred results page
[TXT]jp_A9xGTa3.results_jalview.html2016-02-24 17:17 13KJalview results options
[TXT]jp_A9xGTa3.results_jalview_app.html2016-02-24 17:17 16KHTML prediction and alignment data
[ ]jp_A9xGTa3.seq2015-04-17 17:15 74 Sequence data file
[TXT]jp_A9xGTa3.simple.html2015-04-17 18:24 1.0KBrief HTML: sequence and prediction only
[TXT]jp_A9xGTa3.svg.html2015-04-17 18:24 25KJalview SVG summary of results
[ ]jp_A9xGTa3.tar.gz2015-04-17 18:24 161KArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.