JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 17:36 4.7KJPred server log file
[TXT]README2016-02-15 12:17 2.1KResults file descriptions
[TXT]d1l6pa_.name2015-04-17 16:38 0 Job name flag file
[ ]jp_xufx3jI.align2015-04-17 17:35 130KPSIBLAST alignment in FASTA format
[TXT]jp_xufx3jI.als2015-04-17 17:35 2.5KAlscript command file for PS/PDF output
[ ]jp_xufx3jI.blast.gz2015-04-17 17:34 607KCompressed PSIBLAST output file
[TXT]jp_xufx3jI.coils.csv2015-04-17 17:35 756 COILS output in CSV format
[ ]jp_xufx3jI.coilseq.lupas_142015-04-17 17:35 5.1KCOILS output, window length 14
[ ]jp_xufx3jI.coilseq.lupas_212015-04-17 17:35 5.1KCOILS output, window length 21
[ ]jp_xufx3jI.coilseq.lupas_282015-04-17 17:35 5.1KCOILS output, window length 28
[ ]jp_xufx3jI.concise2015-04-17 17:35 251KPrediction: coiled-coil, solvent, alignment
[ ]jp_xufx3jI.concise.blc2015-04-17 17:35 130KBLC format prediction and alignment data
[ ]jp_xufx3jI.concise.fasta2015-04-17 17:35 131KPrediction: coiled-coil, solvent, alignment
[ ]jp_xufx3jI.concise.pdf2015-04-17 17:35 856KPDF prediction and alignment data
[ ]jp_xufx3jI.concise.ps2015-04-17 17:35 15MPrediction: coiled-coil, solvent, alignment
[ ]jp_xufx3jI.fasta2015-04-17 17:21 135 Input query sequence in FASTA format
[ ]jp_xufx3jI.full_MSA.fasta2015-04-17 17:34 774KFull MSA before JPred filters in FASTA
[TXT]jp_xufx3jI.full_MSA.fasta.noGaps.html2015-04-17 17:35 313KFull MSA before JPred filters in FASTA
[TXT]jp_xufx3jI.full_MSA.fasta.withGaps.html2015-04-17 17:35 4.0MFull MSA before JPred filters in FASTA
[ ]jp_xufx3jI.hmm2015-04-17 17:35 23KHHMer2 profile of the alignment
[TXT]jp_xufx3jI.html2015-04-17 17:35 319KHTML prediction and alignment data
[ ]jp_xufx3jI.input2015-04-17 16:38 128 Raw input data for analysis
[ ]jp_xufx3jI.jalview2015-04-17 17:35 3.2KJalview annotation file for alignment
[ ]jp_xufx3jI.jnet2015-04-17 17:35 4.5KJnet secondary structure output
[TXT]jp_xufx3jI.profile2015-04-17 17:33 20KPSIBLAST profile from alignment
[ ]jp_xufx3jI.pssm2015-04-17 17:35 26KPSIBLAST PSSM for Jnet
[TXT]jp_xufx3jI.results.html2016-02-15 12:17 57KJPred results page
[TXT]jp_xufx3jI.results_jalview.html2016-02-24 17:17 13KJalview results options
[TXT]jp_xufx3jI.results_jalview_app.html2016-02-24 17:17 16KHTML prediction and alignment data
[ ]jp_xufx3jI.seq2015-04-17 16:38 135 Sequence data file
[TXT]jp_xufx3jI.simple.html2015-04-17 17:35 1.3KBrief HTML: sequence and prediction only
[TXT]jp_xufx3jI.svg.html2015-04-17 17:35 49KJalview SVG summary of results
[ ]jp_xufx3jI.tar.gz2015-04-17 17:36 1.9MArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.