JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 21:58 4.7KJPred server log file
[TXT]README2016-02-15 12:17 2.1KResults file descriptions
[TXT]d1lkka_.name2015-04-17 19:05 0 Job name flag file
[ ]jp_IQ6rV0v.align2015-04-17 21:57 69KPSIBLAST alignment in FASTA format
[TXT]jp_IQ6rV0v.als2015-04-17 21:57 2.2KAlscript command file for PS/PDF output
[ ]jp_IQ6rV0v.blast.gz2015-04-17 21:56 5.9MCompressed PSIBLAST output file
[TXT]jp_IQ6rV0v.coils.csv2015-04-17 21:57 660 COILS output in CSV format
[ ]jp_IQ6rV0v.coilseq.lupas_142015-04-17 21:57 4.4KCOILS output, window length 14
[ ]jp_IQ6rV0v.coilseq.lupas_212015-04-17 21:57 4.4KCOILS output, window length 21
[ ]jp_IQ6rV0v.coilseq.lupas_282015-04-17 21:57 4.4KCOILS output, window length 28
[ ]jp_IQ6rV0v.concise2015-04-17 21:57 135KPrediction: coiled-coil, solvent, alignment
[ ]jp_IQ6rV0v.concise.blc2015-04-17 21:57 69KBLC format prediction and alignment data
[ ]jp_IQ6rV0v.concise.fasta2015-04-17 21:57 70KPrediction: coiled-coil, solvent, alignment
[ ]jp_IQ6rV0v.concise.pdf2015-04-17 21:57 453KPDF prediction and alignment data
[ ]jp_IQ6rV0v.concise.ps2015-04-17 21:57 7.8MPrediction: coiled-coil, solvent, alignment
[ ]jp_IQ6rV0v.fasta2015-04-17 21:21 119 Input query sequence in FASTA format
[ ]jp_IQ6rV0v.full_MSA.fasta2015-04-17 21:57 12MFull MSA before JPred filters in FASTA
[TXT]jp_IQ6rV0v.full_MSA.fasta.noGaps.html2015-04-17 21:58 1.9MFull MSA before JPred filters in FASTA
[TXT]jp_IQ6rV0v.full_MSA.fasta.withGaps.html2015-04-17 21:58 31MFull MSA before JPred filters in FASTA
[ ]jp_IQ6rV0v.hmm2015-04-17 21:57 20KHHMer2 profile of the alignment
[TXT]jp_IQ6rV0v.html2015-04-17 21:57 186KHTML prediction and alignment data
[ ]jp_IQ6rV0v.input2015-04-17 19:05 112 Raw input data for analysis
[ ]jp_IQ6rV0v.jalview2015-04-17 21:57 2.9KJalview annotation file for alignment
[ ]jp_IQ6rV0v.jnet2015-04-17 21:57 3.9KJnet secondary structure output
[TXT]jp_IQ6rV0v.profile2015-04-17 21:50 17KPSIBLAST profile from alignment
[ ]jp_IQ6rV0v.pssm2015-04-17 21:57 23KPSIBLAST PSSM for Jnet
[TXT]jp_IQ6rV0v.results.html2016-02-15 12:17 52KJPred results page
[TXT]jp_IQ6rV0v.results_jalview.html2016-02-24 17:17 13KJalview results options
[TXT]jp_IQ6rV0v.results_jalview_app.html2016-02-24 17:17 16KHTML prediction and alignment data
[ ]jp_IQ6rV0v.seq2015-04-17 19:05 119 Sequence data file
[TXT]jp_IQ6rV0v.simple.html2015-04-17 21:57 1.2KBrief HTML: sequence and prediction only
[TXT]jp_IQ6rV0v.svg.html2015-04-17 21:58 43KJalview SVG summary of results
[ ]jp_IQ6rV0v.tar.gz2015-04-17 21:58 9.2MArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.