A Protein Secondary Structure Prediction Server
| Name | Last modified | Size | Description | |
|---|---|---|---|---|
![[TXT]](/icons/text.gif){kind=icon} | LOG | 2015-04-17 20:24 | 4.7K | JPred server log file |
| README | 2016-02-15 12:17 | 2.1K | Results file descriptions |
| d1llaa1.name | 2015-04-17 18:26 | 0 | Job name flag file |
![[ ]](/icons/unknown.gif){kind=icon} | jp_c5QV3yx.align | 2015-04-17 20:24 | 44K | PSIBLAST alignment in FASTA format |
| jp_c5QV3yx.als | 2015-04-17 20:24 | 2.2K | Alscript command file for PS/PDF output |
![[ ]](/icons/compressed.gif){kind=icon} | jp_c5QV3yx.blast.gz | 2015-04-17 20:23 | 180K | Compressed PSIBLAST output file |
| jp_c5QV3yx.coils.csv | 2015-04-17 20:24 | 624 | COILS output in CSV format |
| jp_c5QV3yx.coilseq.lupas_14 | 2015-04-17 20:24 | 4.2K | COILS output, window length 14 |
| jp_c5QV3yx.coilseq.lupas_21 | 2015-04-17 20:24 | 4.2K | COILS output, window length 21 |
| jp_c5QV3yx.coilseq.lupas_28 | 2015-04-17 20:24 | 4.2K | COILS output, window length 28 |
| jp_c5QV3yx.concise | 2015-04-17 20:24 | 87K | Prediction: coiled-coil, solvent, alignment |
| jp_c5QV3yx.concise.blc | 2015-04-17 20:24 | 45K | BLC format prediction and alignment data |
| jp_c5QV3yx.concise.fasta | 2015-04-17 20:24 | 45K | Prediction: coiled-coil, solvent, alignment |
![[ ]](/icons/layout.gif){kind=icon} | jp_c5QV3yx.concise.pdf | 2015-04-17 20:24 | 291K | PDF prediction and alignment data |
| jp_c5QV3yx.concise.ps | 2015-04-17 20:24 | 5.1M | Prediction: coiled-coil, solvent, alignment |
| jp_c5QV3yx.fasta | 2015-04-17 20:20 | 113 | Input query sequence in FASTA format |
| jp_c5QV3yx.full_MSA.fasta | 2015-04-17 20:23 | 278K | Full MSA before JPred filters in FASTA |
| jp_c5QV3yx.full_MSA.fasta.noGaps.html | 2015-04-17 20:24 | 140K | Full MSA before JPred filters in FASTA |
| jp_c5QV3yx.full_MSA.fasta.withGaps.html | 2015-04-17 20:24 | 839K | Full MSA before JPred filters in FASTA |
| jp_c5QV3yx.hmm | 2015-04-17 20:24 | 19K | HHMer2 profile of the alignment |
| jp_c5QV3yx.html | 2015-04-17 20:24 | 128K | HTML prediction and alignment data |
| jp_c5QV3yx.input | 2015-04-17 18:26 | 106 | Raw input data for analysis |
| jp_c5QV3yx.jalview | 2015-04-17 20:24 | 2.8K | Jalview annotation file for alignment |
| jp_c5QV3yx.jnet | 2015-04-17 20:24 | 3.7K | Jnet secondary structure output |
| jp_c5QV3yx.profile | 2015-04-17 20:22 | 16K | PSIBLAST profile from alignment |
| jp_c5QV3yx.pssm | 2015-04-17 20:24 | 21K | PSIBLAST PSSM for Jnet |
| jp_c5QV3yx.results.html | 2016-02-15 12:17 | 50K | JPred results page |
| jp_c5QV3yx.results_jalview.html | 2016-02-24 17:17 | 13K | Jalview results options |
| jp_c5QV3yx.results_jalview_app.html | 2016-02-24 17:17 | 16K | HTML prediction and alignment data |
| jp_c5QV3yx.seq | 2015-04-17 18:26 | 113 | Sequence data file |
| jp_c5QV3yx.simple.html | 2015-04-17 20:24 | 1.2K | Brief HTML: sequence and prediction only |
![[TXT]](jp_c5QV3yx.svg.html) | jp_c5QV3yx.svg.html | 2015-04-17 20:24 | 42K | Jalview SVG summary of results |
| jp_c5QV3yx.tar.gz | 2015-04-17 20:24 | 645K | Archive containing complete results |
