JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 17:40 4.7KJPred server log file
[TXT]README2016-02-15 12:17 2.1KResults file descriptions
[TXT]d1lm5a_.name2015-04-17 16:38 0 Job name flag file
[ ]jp_U0WRzFc.align2015-04-17 17:38 173KPSIBLAST alignment in FASTA format
[TXT]jp_U0WRzFc.als2015-04-17 17:39 4.3KAlscript command file for PS/PDF output
[ ]jp_U0WRzFc.blast.gz2015-04-17 17:36 11MCompressed PSIBLAST output file
[TXT]jp_U0WRzFc.coils.csv2015-04-17 17:38 1.1KCOILS output in CSV format
[ ]jp_U0WRzFc.coilseq.lupas_142015-04-17 17:38 7.9KCOILS output, window length 14
[ ]jp_U0WRzFc.coilseq.lupas_212015-04-17 17:38 7.9KCOILS output, window length 21
[ ]jp_U0WRzFc.coilseq.lupas_282015-04-17 17:38 7.9KCOILS output, window length 28
[ ]jp_U0WRzFc.concise2015-04-17 17:38 340KPrediction: coiled-coil, solvent, alignment
[ ]jp_U0WRzFc.concise.blc2015-04-17 17:39 173KBLC format prediction and alignment data
[ ]jp_U0WRzFc.concise.fasta2015-04-17 17:38 176KPrediction: coiled-coil, solvent, alignment
[ ]jp_U0WRzFc.concise.pdf2015-04-17 17:39 1.0MPDF prediction and alignment data
[ ]jp_U0WRzFc.concise.ps2015-04-17 17:39 20MPrediction: coiled-coil, solvent, alignment
[ ]jp_U0WRzFc.fasta2015-04-17 17:21 204 Input query sequence in FASTA format
[ ]jp_U0WRzFc.full_MSA.fasta2015-04-17 17:37 38MFull MSA before JPred filters in FASTA
[TXT]jp_U0WRzFc.full_MSA.fasta.noGaps.html2015-04-17 17:40 2.1MFull MSA before JPred filters in FASTA
[TXT]jp_U0WRzFc.full_MSA.fasta.withGaps.html2015-04-17 17:40 68MFull MSA before JPred filters in FASTA
[ ]jp_U0WRzFc.hmm2015-04-17 17:38 35KHHMer2 profile of the alignment
[TXT]jp_U0WRzFc.html2015-04-17 17:38 347KHTML prediction and alignment data
[ ]jp_U0WRzFc.input2015-04-17 16:38 196 Raw input data for analysis
[ ]jp_U0WRzFc.jalview2015-04-17 17:38 4.6KJalview annotation file for alignment
[ ]jp_U0WRzFc.jnet2015-04-17 17:38 6.9KJnet secondary structure output
[TXT]jp_U0WRzFc.profile2015-04-17 17:34 30KPSIBLAST profile from alignment
[ ]jp_U0WRzFc.pssm2015-04-17 17:38 41KPSIBLAST PSSM for Jnet
[TXT]jp_U0WRzFc.results.html2016-02-15 12:17 90KJPred results page
[TXT]jp_U0WRzFc.results_jalview.html2016-02-24 17:17 13KJalview results options
[TXT]jp_U0WRzFc.results_jalview_app.html2016-02-24 17:17 16KHTML prediction and alignment data
[ ]jp_U0WRzFc.seq2015-04-17 16:38 204 Sequence data file
[TXT]jp_U0WRzFc.simple.html2015-04-17 17:38 1.7KBrief HTML: sequence and prediction only
[TXT]jp_U0WRzFc.svg.html2015-04-17 17:40 82KJalview SVG summary of results
[ ]jp_U0WRzFc.tar.gz2015-04-17 17:40 18MArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.