JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

Home
REST API
About
F.A.Q.
Help & Tutorials
Monitoring
Contact
Publications
 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 16:19 4.7KJPred server log file
[TXT]README2016-02-15 12:17 2.1KResults file descriptions
[TXT]d1lm8v_.name2015-04-17 15:58 0 Job name flag file
[ ]jp_SCqAGyL.align2015-04-17 16:19 22KPSIBLAST alignment in FASTA format
[TXT]jp_SCqAGyL.als2015-04-17 16:19 2.8KAlscript command file for PS/PDF output
[ ]jp_SCqAGyL.blast.gz2015-04-17 16:19 105KCompressed PSIBLAST output file
[TXT]jp_SCqAGyL.coils.csv2015-04-17 16:19 930 COILS output in CSV format
[ ]jp_SCqAGyL.coilseq.lupas_142015-04-17 16:19 6.3KCOILS output, window length 14
[ ]jp_SCqAGyL.coilseq.lupas_212015-04-17 16:19 6.3KCOILS output, window length 21
[ ]jp_SCqAGyL.coilseq.lupas_282015-04-17 16:19 6.3KCOILS output, window length 28
[ ]jp_SCqAGyL.concise2015-04-17 16:19 49KPrediction: coiled-coil, solvent, alignment
[ ]jp_SCqAGyL.concise.blc2015-04-17 16:19 24KBLC format prediction and alignment data
[ ]jp_SCqAGyL.concise.fasta2015-04-17 16:19 24KPrediction: coiled-coil, solvent, alignment
[ ]jp_SCqAGyL.concise.pdf2015-04-17 16:19 162KPDF prediction and alignment data
[ ]jp_SCqAGyL.concise.ps2015-04-17 16:19 2.8MPrediction: coiled-coil, solvent, alignment
[ ]jp_SCqAGyL.fasta2015-04-17 16:16 165 Input query sequence in FASTA format
[ ]jp_SCqAGyL.full_MSA.fasta2015-04-17 16:19 187KFull MSA before JPred filters in FASTA
[TXT]jp_SCqAGyL.full_MSA.fasta.noGaps.html2015-04-17 16:19 91KFull MSA before JPred filters in FASTA
[TXT]jp_SCqAGyL.full_MSA.fasta.withGaps.html2015-04-17 16:19 864KFull MSA before JPred filters in FASTA
[ ]jp_SCqAGyL.hmm2015-04-17 16:19 28KHHMer2 profile of the alignment
[TXT]jp_SCqAGyL.html2015-04-17 16:19 64KHTML prediction and alignment data
[ ]jp_SCqAGyL.input2015-04-17 15:58 157 Raw input data for analysis
[ ]jp_SCqAGyL.jalview2015-04-17 16:19 3.8KJalview annotation file for alignment
[ ]jp_SCqAGyL.jnet2015-04-17 16:19 5.5KJnet secondary structure output
[TXT]jp_SCqAGyL.profile2015-04-17 16:18 24KPSIBLAST profile from alignment
[ ]jp_SCqAGyL.pssm2015-04-17 16:19 32KPSIBLAST PSSM for Jnet
[TXT]jp_SCqAGyL.results.html2016-02-15 12:17 69KJPred results page
[TXT]jp_SCqAGyL.results_jalview.html2016-02-24 17:17 13KJalview results options
[TXT]jp_SCqAGyL.results_jalview_app.html2016-02-24 17:17 16KHTML prediction and alignment data
[ ]jp_SCqAGyL.seq2015-04-17 15:58 165 Sequence data file
[TXT]jp_SCqAGyL.simple.html2015-04-17 16:19 1.4KBrief HTML: sequence and prediction only
[TXT]jp_SCqAGyL.svg.html2015-04-17 16:19 61KJalview SVG summary of results
[ ]jp_SCqAGyL.tar.gz2015-04-17 16:19 417KArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.