JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 17:24 4.7KJPred server log file
[TXT]README2016-02-15 12:17 2.1KResults file descriptions
[TXT]d1lmia_.name2015-04-17 16:38 0 Job name flag file
[ ]jp__r7KTYx.align2015-04-17 17:24 8.7KPSIBLAST alignment in FASTA format
[TXT]jp__r7KTYx.als2015-04-17 17:24 2.5KAlscript command file for PS/PDF output
[ ]jp__r7KTYx.blast.gz2015-04-17 17:24 23KCompressed PSIBLAST output file
[TXT]jp__r7KTYx.coils.csv2015-04-17 17:24 816 COILS output in CSV format
[ ]jp__r7KTYx.coilseq.lupas_142015-04-17 17:24 5.5KCOILS output, window length 14
[ ]jp__r7KTYx.coilseq.lupas_212015-04-17 17:24 5.5KCOILS output, window length 21
[ ]jp__r7KTYx.coilseq.lupas_282015-04-17 17:24 5.5KCOILS output, window length 28
[ ]jp__r7KTYx.concise2015-04-17 17:24 22KPrediction: coiled-coil, solvent, alignment
[ ]jp__r7KTYx.concise.blc2015-04-17 17:24 11KBLC format prediction and alignment data
[ ]jp__r7KTYx.concise.fasta2015-04-17 17:24 10KPrediction: coiled-coil, solvent, alignment
[ ]jp__r7KTYx.concise.pdf2015-04-17 17:24 65KPDF prediction and alignment data
[ ]jp__r7KTYx.concise.ps2015-04-17 17:24 1.2MPrediction: coiled-coil, solvent, alignment
[ ]jp__r7KTYx.fasta2015-04-17 17:22 145 Input query sequence in FASTA format
[ ]jp__r7KTYx.full_MSA.fasta2015-04-17 17:24 18KFull MSA before JPred filters in FASTA
[TXT]jp__r7KTYx.full_MSA.fasta.noGaps.html2015-04-17 17:24 27KFull MSA before JPred filters in FASTA
[TXT]jp__r7KTYx.full_MSA.fasta.withGaps.html2015-04-17 17:24 64KFull MSA before JPred filters in FASTA
[ ]jp__r7KTYx.hmm2015-04-17 17:24 25KHHMer2 profile of the alignment
[TXT]jp__r7KTYx.html2015-04-17 17:24 31KHTML prediction and alignment data
[ ]jp__r7KTYx.input2015-04-17 16:38 138 Raw input data for analysis
[ ]jp__r7KTYx.jalview2015-04-17 17:24 3.4KJalview annotation file for alignment
[ ]jp__r7KTYx.jnet2015-04-17 17:24 4.8KJnet secondary structure output
[TXT]jp__r7KTYx.profile2015-04-17 17:23 21KPSIBLAST profile from alignment
[ ]jp__r7KTYx.pssm2015-04-17 17:24 28KPSIBLAST PSSM for Jnet
[TXT]jp__r7KTYx.results.html2016-02-15 12:17 61KJPred results page
[TXT]jp__r7KTYx.results_jalview.html2016-02-24 17:17 13KJalview results options
[TXT]jp__r7KTYx.results_jalview_app.html2016-02-24 17:17 16KHTML prediction and alignment data
[ ]jp__r7KTYx.seq2015-04-17 16:38 145 Sequence data file
[TXT]jp__r7KTYx.simple.html2015-04-17 17:24 1.4KBrief HTML: sequence and prediction only
[TXT]jp__r7KTYx.svg.html2015-04-17 17:24 52KJalview SVG summary of results
[ ]jp__r7KTYx.tar.gz2015-04-17 17:24 143KArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.