A Protein Secondary Structure Prediction Server
| Name | Last modified | Size | Description | |
|---|---|---|---|---|
![[TXT]](/icons/text.gif){kind=icon} | LOG | 2015-04-17 20:24 | 4.7K | JPred server log file |
| README | 2016-02-15 12:17 | 2.1K | Results file descriptions |
| d1lnsa1.name | 2015-04-17 18:27 | 0 | Job name flag file |
![[ ]](/icons/unknown.gif){kind=icon} | jp_JSBg7ZE.align | 2015-04-17 20:24 | 21K | PSIBLAST alignment in FASTA format |
| jp_JSBg7ZE.als | 2015-04-17 20:24 | 2.5K | Alscript command file for PS/PDF output |
![[ ]](/icons/compressed.gif){kind=icon} | jp_JSBg7ZE.blast.gz | 2015-04-17 20:24 | 65K | Compressed PSIBLAST output file |
| jp_JSBg7ZE.coils.csv | 2015-04-17 20:24 | 900 | COILS output in CSV format |
| jp_JSBg7ZE.coilseq.lupas_14 | 2015-04-17 20:24 | 6.1K | COILS output, window length 14 |
| jp_JSBg7ZE.coilseq.lupas_21 | 2015-04-17 20:24 | 6.1K | COILS output, window length 21 |
| jp_JSBg7ZE.coilseq.lupas_28 | 2015-04-17 20:24 | 6.1K | COILS output, window length 28 |
| jp_JSBg7ZE.concise | 2015-04-17 20:24 | 47K | Prediction: coiled-coil, solvent, alignment |
| jp_JSBg7ZE.concise.blc | 2015-04-17 20:24 | 23K | BLC format prediction and alignment data |
| jp_JSBg7ZE.concise.fasta | 2015-04-17 20:24 | 23K | Prediction: coiled-coil, solvent, alignment |
![[ ]](/icons/layout.gif){kind=icon} | jp_JSBg7ZE.concise.pdf | 2015-04-17 20:24 | 159K | PDF prediction and alignment data |
| jp_JSBg7ZE.concise.ps | 2015-04-17 20:24 | 2.8M | Prediction: coiled-coil, solvent, alignment |
| jp_JSBg7ZE.fasta | 2015-04-17 20:21 | 160 | Input query sequence in FASTA format |
| jp_JSBg7ZE.full_MSA.fasta | 2015-04-17 20:24 | 64K | Full MSA before JPred filters in FASTA |
| jp_JSBg7ZE.full_MSA.fasta.noGaps.html | 2015-04-17 20:24 | 47K | Full MSA before JPred filters in FASTA |
| jp_JSBg7ZE.full_MSA.fasta.withGaps.html | 2015-04-17 20:24 | 260K | Full MSA before JPred filters in FASTA |
| jp_JSBg7ZE.hmm | 2015-04-17 20:24 | 27K | HHMer2 profile of the alignment |
| jp_JSBg7ZE.html | 2015-04-17 20:24 | 62K | HTML prediction and alignment data |
| jp_JSBg7ZE.input | 2015-04-17 18:27 | 152 | Raw input data for analysis |
| jp_JSBg7ZE.jalview | 2015-04-17 20:24 | 3.7K | Jalview annotation file for alignment |
| jp_JSBg7ZE.jnet | 2015-04-17 20:24 | 5.4K | Jnet secondary structure output |
| jp_JSBg7ZE.profile | 2015-04-17 20:23 | 23K | PSIBLAST profile from alignment |
| jp_JSBg7ZE.pssm | 2015-04-17 20:24 | 31K | PSIBLAST PSSM for Jnet |
| jp_JSBg7ZE.results.html | 2016-02-15 12:17 | 68K | JPred results page |
| jp_JSBg7ZE.results_jalview.html | 2016-02-24 17:17 | 13K | Jalview results options |
| jp_JSBg7ZE.results_jalview_app.html | 2016-02-24 17:17 | 16K | HTML prediction and alignment data |
| jp_JSBg7ZE.seq | 2015-04-17 18:27 | 160 | Sequence data file |
| jp_JSBg7ZE.simple.html | 2015-04-17 20:24 | 1.3K | Brief HTML: sequence and prediction only |
![[TXT]](jp_JSBg7ZE.svg.html) | jp_JSBg7ZE.svg.html | 2015-04-17 20:24 | 60K | Jalview SVG summary of results |
| jp_JSBg7ZE.tar.gz | 2015-04-17 20:24 | 333K | Archive containing complete results |
