A Protein Secondary Structure Prediction Server
| Name | Last modified | Size | Description | |
|---|---|---|---|---|
![[TXT]](/icons/text.gif){kind=icon} | LOG | 2015-04-17 21:15 | 4.7K | JPred server log file |
| README | 2016-02-15 12:17 | 2.1K | Results file descriptions |
| d1ls1a1.name | 2015-04-17 18:27 | 0 | Job name flag file |
![[ ]](/icons/unknown.gif){kind=icon} | jp_SUAL8ch.align | 2015-04-17 21:15 | 50K | PSIBLAST alignment in FASTA format |
| jp_SUAL8ch.als | 2015-04-17 21:15 | 1.8K | Alscript command file for PS/PDF output |
![[ ]](/icons/compressed.gif){kind=icon} | jp_SUAL8ch.blast.gz | 2015-04-17 21:15 | 620K | Compressed PSIBLAST output file |
| jp_SUAL8ch.coils.csv | 2015-04-17 21:15 | 558 | COILS output in CSV format |
| jp_SUAL8ch.coilseq.lupas_14 | 2015-04-17 21:15 | 3.7K | COILS output, window length 14 |
| jp_SUAL8ch.coilseq.lupas_21 | 2015-04-17 21:15 | 3.7K | COILS output, window length 21 |
| jp_SUAL8ch.coilseq.lupas_28 | 2015-04-17 21:15 | 3.7K | COILS output, window length 28 |
| jp_SUAL8ch.concise | 2015-04-17 21:15 | 97K | Prediction: coiled-coil, solvent, alignment |
| jp_SUAL8ch.concise.blc | 2015-04-17 21:15 | 50K | BLC format prediction and alignment data |
| jp_SUAL8ch.concise.fasta | 2015-04-17 21:15 | 51K | Prediction: coiled-coil, solvent, alignment |
![[ ]](/icons/layout.gif){kind=icon} | jp_SUAL8ch.concise.pdf | 2015-04-17 21:15 | 323K | PDF prediction and alignment data |
| jp_SUAL8ch.concise.ps | 2015-04-17 21:15 | 5.7M | Prediction: coiled-coil, solvent, alignment |
| jp_SUAL8ch.fasta | 2015-04-17 20:21 | 102 | Input query sequence in FASTA format |
| jp_SUAL8ch.full_MSA.fasta | 2015-04-17 21:15 | 907K | Full MSA before JPred filters in FASTA |
| jp_SUAL8ch.full_MSA.fasta.noGaps.html | 2015-04-17 21:15 | 662K | Full MSA before JPred filters in FASTA |
| jp_SUAL8ch.full_MSA.fasta.withGaps.html | 2015-04-17 21:15 | 3.7M | Full MSA before JPred filters in FASTA |
| jp_SUAL8ch.hmm | 2015-04-17 21:15 | 17K | HHMer2 profile of the alignment |
| jp_SUAL8ch.html | 2015-04-17 21:15 | 152K | HTML prediction and alignment data |
| jp_SUAL8ch.input | 2015-04-17 18:27 | 95 | Raw input data for analysis |
| jp_SUAL8ch.jalview | 2015-04-17 21:15 | 2.6K | Jalview annotation file for alignment |
| jp_SUAL8ch.jnet | 2015-04-17 21:15 | 3.3K | Jnet secondary structure output |
| jp_SUAL8ch.profile | 2015-04-17 20:52 | 14K | PSIBLAST profile from alignment |
| jp_SUAL8ch.pssm | 2015-04-17 21:15 | 19K | PSIBLAST PSSM for Jnet |
| jp_SUAL8ch.results.html | 2016-02-15 12:17 | 45K | JPred results page |
| jp_SUAL8ch.results_jalview.html | 2016-02-24 17:17 | 13K | Jalview results options |
| jp_SUAL8ch.results_jalview_app.html | 2016-02-24 17:17 | 16K | HTML prediction and alignment data |
| jp_SUAL8ch.seq | 2015-04-17 18:27 | 102 | Sequence data file |
| jp_SUAL8ch.simple.html | 2015-04-17 21:15 | 1.1K | Brief HTML: sequence and prediction only |
![[TXT]](jp_SUAL8ch.svg.html) | jp_SUAL8ch.svg.html | 2015-04-17 21:15 | 37K | Jalview SVG summary of results |
| jp_SUAL8ch.tar.gz | 2015-04-17 21:15 | 1.4M | Archive containing complete results |
