JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 20:58 4.7KJPred server log file
[TXT]README2016-02-15 12:17 2.1KResults file descriptions
[TXT]d1lsha2.name2015-04-17 18:27 0 Job name flag file
[ ]jp__A9AAp2.align2015-04-17 20:57 184KPSIBLAST alignment in FASTA format
[TXT]jp__A9AAp2.als2015-04-17 20:57 3.7KAlscript command file for PS/PDF output
[ ]jp__A9AAp2.blast.gz2015-04-17 20:56 1.2MCompressed PSIBLAST output file
[TXT]jp__A9AAp2.coils.csv2015-04-17 20:57 1.6KCOILS output in CSV format
[ ]jp__A9AAp2.coilseq.lupas_142015-04-17 20:57 11KCOILS output, window length 14
[ ]jp__A9AAp2.coilseq.lupas_212015-04-17 20:57 11KCOILS output, window length 21
[ ]jp__A9AAp2.coilseq.lupas_282015-04-17 20:57 11KCOILS output, window length 28
[ ]jp__A9AAp2.concise2015-04-17 20:57 368KPrediction: coiled-coil, solvent, alignment
[ ]jp__A9AAp2.concise.blc2015-04-17 20:57 186KBLC format prediction and alignment data
[ ]jp__A9AAp2.concise.fasta2015-04-17 20:57 187KPrediction: coiled-coil, solvent, alignment
[ ]jp__A9AAp2.concise.pdf2015-04-17 20:58 1.3MPDF prediction and alignment data
[ ]jp__A9AAp2.concise.ps2015-04-17 20:57 23MPrediction: coiled-coil, solvent, alignment
[ ]jp__A9AAp2.fasta2015-04-17 20:21 284 Input query sequence in FASTA format
[ ]jp__A9AAp2.full_MSA.fasta2015-04-17 20:57 2.6MFull MSA before JPred filters in FASTA
[TXT]jp__A9AAp2.full_MSA.fasta.noGaps.html2015-04-17 20:58 430KFull MSA before JPred filters in FASTA
[TXT]jp__A9AAp2.full_MSA.fasta.withGaps.html2015-04-17 20:58 8.4MFull MSA before JPred filters in FASTA
[ ]jp__A9AAp2.hmm2015-04-17 20:57 50KHHMer2 profile of the alignment
[TXT]jp__A9AAp2.html2015-04-17 20:57 332KHTML prediction and alignment data
[ ]jp__A9AAp2.input2015-04-17 18:27 275 Raw input data for analysis
[ ]jp__A9AAp2.jalview2015-04-17 20:57 6.2KJalview annotation file for alignment
[ ]jp__A9AAp2.jnet2015-04-17 20:57 9.8KJnet secondary structure output
[TXT]jp__A9AAp2.profile2015-04-17 20:52 43KPSIBLAST profile from alignment
[ ]jp__A9AAp2.pssm2015-04-17 20:57 58KPSIBLAST PSSM for Jnet
[TXT]jp__A9AAp2.results.html2016-02-15 12:17 113KJPred results page
[TXT]jp__A9AAp2.results_jalview.html2016-02-24 17:17 13KJalview results options
[TXT]jp__A9AAp2.results_jalview_app.html2016-02-24 17:17 16KHTML prediction and alignment data
[ ]jp__A9AAp2.seq2015-04-17 18:27 284 Sequence data file
[TXT]jp__A9AAp2.simple.html2015-04-17 20:57 1.8KBrief HTML: sequence and prediction only
[TXT]jp__A9AAp2.svg.html2015-04-17 20:58 105KJalview SVG summary of results
[ ]jp__A9AAp2.tar.gz2015-04-17 20:58 3.6MArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.