JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 19:31 4.7KJPred server log file
[TXT]README2016-02-15 12:17 2.1KResults file descriptions
[TXT]d1lsla1.name2015-04-17 17:51 0 Job name flag file
[ ]jp_WpiLXIk.align2015-04-17 19:30 46KPSIBLAST alignment in FASTA format
[TXT]jp_WpiLXIk.als2015-04-17 19:31 1.5KAlscript command file for PS/PDF output
[ ]jp_WpiLXIk.blast.gz2015-04-17 19:30 3.2MCompressed PSIBLAST output file
[TXT]jp_WpiLXIk.coils.csv2015-04-17 19:31 354 COILS output in CSV format
[ ]jp_WpiLXIk.coilseq.lupas_142015-04-17 19:31 2.3KCOILS output, window length 14
[ ]jp_WpiLXIk.coilseq.lupas_212015-04-17 19:31 2.3KCOILS output, window length 21
[ ]jp_WpiLXIk.coilseq.lupas_282015-04-17 19:31 2.3KCOILS output, window length 28
[ ]jp_WpiLXIk.concise2015-04-17 19:31 87KPrediction: coiled-coil, solvent, alignment
[ ]jp_WpiLXIk.concise.blc2015-04-17 19:31 47KBLC format prediction and alignment data
[ ]jp_WpiLXIk.concise.fasta2015-04-17 19:31 47KPrediction: coiled-coil, solvent, alignment
[ ]jp_WpiLXIk.concise.pdf2015-04-17 19:31 220KPDF prediction and alignment data
[ ]jp_WpiLXIk.concise.ps2015-04-17 19:31 4.3MPrediction: coiled-coil, solvent, alignment
[ ]jp_WpiLXIk.fasta2015-04-17 19:22 67 Input query sequence in FASTA format
[ ]jp_WpiLXIk.full_MSA.fasta2015-04-17 19:30 6.8MFull MSA before JPred filters in FASTA
[TXT]jp_WpiLXIk.full_MSA.fasta.noGaps.html2015-04-17 19:31 1.9MFull MSA before JPred filters in FASTA
[TXT]jp_WpiLXIk.full_MSA.fasta.withGaps.html2015-04-17 19:31 20MFull MSA before JPred filters in FASTA
[ ]jp_WpiLXIk.hmm2015-04-17 19:31 10KHHMer2 profile of the alignment
[TXT]jp_WpiLXIk.html2015-04-17 19:31 174KHTML prediction and alignment data
[ ]jp_WpiLXIk.input2015-04-17 17:51 61 Raw input data for analysis
[ ]jp_WpiLXIk.jalview2015-04-17 19:31 1.8KJalview annotation file for alignment
[ ]jp_WpiLXIk.jnet2015-04-17 19:31 2.1KJnet secondary structure output
[TXT]jp_WpiLXIk.profile2015-04-17 19:28 9.1KPSIBLAST profile from alignment
[ ]jp_WpiLXIk.pssm2015-04-17 19:30 12KPSIBLAST PSSM for Jnet
[TXT]jp_WpiLXIk.results.html2016-02-15 12:17 31KJPred results page
[TXT]jp_WpiLXIk.results_jalview.html2016-02-24 17:17 13KJalview results options
[TXT]jp_WpiLXIk.results_jalview_app.html2016-02-24 17:17 16KHTML prediction and alignment data
[ ]jp_WpiLXIk.seq2015-04-17 17:51 67 Sequence data file
[TXT]jp_WpiLXIk.simple.html2015-04-17 19:31 1.0KBrief HTML: sequence and prediction only
[TXT]jp_WpiLXIk.svg.html2015-04-17 19:31 23KJalview SVG summary of results
[ ]jp_WpiLXIk.tar.gz2015-04-17 19:31 5.1MArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.