JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 19:07 4.7KJPred server log file
[TXT]README2016-02-15 12:17 2.1KResults file descriptions
[TXT]d1m22a_.name2015-04-17 16:39 0 Job name flag file
[ ]jp_zy_e8qq.align2015-04-17 19:03 443KPSIBLAST alignment in FASTA format
[TXT]jp_zy_e8qq.als2015-04-17 19:03 4.6KAlscript command file for PS/PDF output
[ ]jp_zy_e8qq.blast.gz2015-04-17 18:54 41MCompressed PSIBLAST output file
[TXT]jp_zy_e8qq.coils.csv2015-04-17 19:03 2.9KCOILS output in CSV format
[ ]jp_zy_e8qq.coilseq.lupas_142015-04-17 19:03 20KCOILS output, window length 14
[ ]jp_zy_e8qq.coilseq.lupas_212015-04-17 19:03 20KCOILS output, window length 21
[ ]jp_zy_e8qq.coilseq.lupas_282015-04-17 19:03 20KCOILS output, window length 28
[ ]jp_zy_e8qq.concise2015-04-17 19:03 885KPrediction: coiled-coil, solvent, alignment
[ ]jp_zy_e8qq.concise.blc2015-04-17 19:03 444KBLC format prediction and alignment data
[ ]jp_zy_e8qq.concise.fasta2015-04-17 19:03 448KPrediction: coiled-coil, solvent, alignment
[ ]jp_zy_e8qq.concise.pdf2015-04-17 19:04 3.3MPDF prediction and alignment data
[ ]jp_zy_e8qq.concise.ps2015-04-17 19:03 58MPrediction: coiled-coil, solvent, alignment
[ ]jp_zy_e8qq.fasta2015-04-17 17:22 506 Input query sequence in FASTA format
[ ]jp_zy_e8qq.full_MSA.fasta2015-04-17 19:00 67MFull MSA before JPred filters in FASTA
[TXT]jp_zy_e8qq.full_MSA.fasta.noGaps.html2015-04-17 19:06 6.0MFull MSA before JPred filters in FASTA
[TXT]jp_zy_e8qq.full_MSA.fasta.withGaps.html2015-04-17 19:06 176MFull MSA before JPred filters in FASTA
[ ]jp_zy_e8qq.hmm2015-04-17 19:03 91KHHMer2 profile of the alignment
[TXT]jp_zy_e8qq.html2015-04-17 19:03 652KHTML prediction and alignment data
[ ]jp_zy_e8qq.input2015-04-17 16:39 494 Raw input data for analysis
[ ]jp_zy_e8qq.jalview2015-04-17 19:03 10KJalview annotation file for alignment
[ ]jp_zy_e8qq.jnet2015-04-17 19:03 18KJnet secondary structure output
[TXT]jp_zy_e8qq.profile2015-04-17 18:49 78KPSIBLAST profile from alignment
[ ]jp_zy_e8qq.pssm2015-04-17 19:03 105KPSIBLAST PSSM for Jnet
[TXT]jp_zy_e8qq.results.html2016-02-15 12:17 196KJPred results page
[TXT]jp_zy_e8qq.results_jalview.html2016-02-24 17:17 13KJalview results options
[TXT]jp_zy_e8qq.results_jalview_app.html2016-02-24 17:17 16KHTML prediction and alignment data
[ ]jp_zy_e8qq.seq2015-04-17 16:39 506 Sequence data file
[TXT]jp_zy_e8qq.simple.html2015-04-17 19:03 2.4KBrief HTML: sequence and prediction only
[TXT]jp_zy_e8qq.svg.html2015-04-17 19:07 188KJalview SVG summary of results
[ ]jp_zy_e8qq.tar.gz2015-04-17 19:07 65MArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.