JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 16:28 4.7KJPred server log file
[TXT]README2016-02-15 12:17 2.1KResults file descriptions
[TXT]d1mc2a_.name2015-04-17 16:01 0 Job name flag file
[ ]jp_XnKPrfU.align2015-04-17 16:27 117KPSIBLAST alignment in FASTA format
[TXT]jp_XnKPrfU.als2015-04-17 16:27 2.1KAlscript command file for PS/PDF output
[ ]jp_XnKPrfU.blast.gz2015-04-17 16:25 795KCompressed PSIBLAST output file
[TXT]jp_XnKPrfU.coils.csv2015-04-17 16:27 762 COILS output in CSV format
[ ]jp_XnKPrfU.coilseq.lupas_142015-04-17 16:27 5.1KCOILS output, window length 14
[ ]jp_XnKPrfU.coilseq.lupas_212015-04-17 16:27 5.1KCOILS output, window length 21
[ ]jp_XnKPrfU.coilseq.lupas_282015-04-17 16:27 5.1KCOILS output, window length 28
[ ]jp_XnKPrfU.concise2015-04-17 16:27 226KPrediction: coiled-coil, solvent, alignment
[ ]jp_XnKPrfU.concise.blc2015-04-17 16:27 117KBLC format prediction and alignment data
[ ]jp_XnKPrfU.concise.fasta2015-04-17 16:27 118KPrediction: coiled-coil, solvent, alignment
[ ]jp_XnKPrfU.concise.pdf2015-04-17 16:28 664KPDF prediction and alignment data
[ ]jp_XnKPrfU.concise.ps2015-04-17 16:28 13MPrediction: coiled-coil, solvent, alignment
[ ]jp_XnKPrfU.fasta2015-04-17 16:20 136 Input query sequence in FASTA format
[ ]jp_XnKPrfU.full_MSA.fasta2015-04-17 16:26 1.3MFull MSA before JPred filters in FASTA
[TXT]jp_XnKPrfU.full_MSA.fasta.noGaps.html2015-04-17 16:28 400KFull MSA before JPred filters in FASTA
[TXT]jp_XnKPrfU.full_MSA.fasta.withGaps.html2015-04-17 16:28 4.4MFull MSA before JPred filters in FASTA
[ ]jp_XnKPrfU.hmm2015-04-17 16:27 23KHHMer2 profile of the alignment
[TXT]jp_XnKPrfU.html2015-04-17 16:27 286KHTML prediction and alignment data
[ ]jp_XnKPrfU.input2015-04-17 16:01 129 Raw input data for analysis
[ ]jp_XnKPrfU.jalview2015-04-17 16:27 3.2KJalview annotation file for alignment
[ ]jp_XnKPrfU.jnet2015-04-17 16:27 4.5KJnet secondary structure output
[TXT]jp_XnKPrfU.profile2015-04-17 16:24 20KPSIBLAST profile from alignment
[ ]jp_XnKPrfU.pssm2015-04-17 16:27 26KPSIBLAST PSSM for Jnet
[TXT]jp_XnKPrfU.results.html2016-02-15 12:17 58KJPred results page
[TXT]jp_XnKPrfU.results_jalview.html2016-02-24 17:17 13KJalview results options
[TXT]jp_XnKPrfU.results_jalview_app.html2016-02-24 17:17 16KHTML prediction and alignment data
[ ]jp_XnKPrfU.seq2015-04-17 16:01 136 Sequence data file
[TXT]jp_XnKPrfU.simple.html2015-04-17 16:27 1.2KBrief HTML: sequence and prediction only
[TXT]jp_XnKPrfU.svg.html2015-04-17 16:28 50KJalview SVG summary of results
[ ]jp_XnKPrfU.tar.gz2015-04-17 16:28 2.0MArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.