A Protein Secondary Structure Prediction Server
| Name | Last modified | Size | Description | |
|---|---|---|---|---|
![[TXT]](/icons/text.gif){kind=icon} | LOG | 2015-04-17 19:26 | 4.7K | JPred server log file |
| README | 2016-02-15 12:17 | 2.1K | Results file descriptions |
| d1mk0a_.name | 2015-04-17 17:52 | 0 | Job name flag file |
![[ ]](/icons/unknown.gif){kind=icon} | jp_Efia5iJ.align | 2015-04-17 19:25 | 86K | PSIBLAST alignment in FASTA format |
| jp_Efia5iJ.als | 2015-04-17 19:25 | 2.1K | Alscript command file for PS/PDF output |
![[ ]](/icons/compressed.gif){kind=icon} | jp_Efia5iJ.blast.gz | 2015-04-17 19:25 | 724K | Compressed PSIBLAST output file |
| jp_Efia5iJ.coils.csv | 2015-04-17 19:25 | 612 | COILS output in CSV format |
| jp_Efia5iJ.coilseq.lupas_14 | 2015-04-17 19:25 | 4.1K | COILS output, window length 14 |
| jp_Efia5iJ.coilseq.lupas_21 | 2015-04-17 19:25 | 4.1K | COILS output, window length 21 |
| jp_Efia5iJ.coilseq.lupas_28 | 2015-04-17 19:25 | 4.1K | COILS output, window length 28 |
| jp_Efia5iJ.concise | 2015-04-17 19:25 | 167K | Prediction: coiled-coil, solvent, alignment |
| jp_Efia5iJ.concise.blc | 2015-04-17 19:25 | 86K | BLC format prediction and alignment data |
| jp_Efia5iJ.concise.fasta | 2015-04-17 19:25 | 87K | Prediction: coiled-coil, solvent, alignment |
![[ ]](/icons/layout.gif){kind=icon} | jp_Efia5iJ.concise.pdf | 2015-04-17 19:25 | 533K | PDF prediction and alignment data |
| jp_Efia5iJ.concise.ps | 2015-04-17 19:25 | 9.6M | Prediction: coiled-coil, solvent, alignment |
| jp_Efia5iJ.fasta | 2015-04-17 19:22 | 111 | Input query sequence in FASTA format |
| jp_Efia5iJ.full_MSA.fasta | 2015-04-17 19:25 | 2.1M | Full MSA before JPred filters in FASTA |
| jp_Efia5iJ.full_MSA.fasta.noGaps.html | 2015-04-17 19:25 | 728K | Full MSA before JPred filters in FASTA |
| jp_Efia5iJ.full_MSA.fasta.withGaps.html | 2015-04-17 19:25 | 8.9M | Full MSA before JPred filters in FASTA |
| jp_Efia5iJ.hmm | 2015-04-17 19:25 | 18K | HHMer2 profile of the alignment |
| jp_Efia5iJ.html | 2015-04-17 19:25 | 242K | HTML prediction and alignment data |
| jp_Efia5iJ.input | 2015-04-17 17:52 | 104 | Raw input data for analysis |
| jp_Efia5iJ.jalview | 2015-04-17 19:25 | 2.8K | Jalview annotation file for alignment |
| jp_Efia5iJ.jnet | 2015-04-17 19:25 | 3.6K | Jnet secondary structure output |
| jp_Efia5iJ.profile | 2015-04-17 19:24 | 16K | PSIBLAST profile from alignment |
| jp_Efia5iJ.pssm | 2015-04-17 19:25 | 21K | PSIBLAST PSSM for Jnet |
| jp_Efia5iJ.results.html | 2016-02-15 12:17 | 48K | JPred results page |
| jp_Efia5iJ.results_jalview.html | 2016-02-24 17:17 | 13K | Jalview results options |
| jp_Efia5iJ.results_jalview_app.html | 2016-02-24 17:17 | 16K | HTML prediction and alignment data |
| jp_Efia5iJ.seq | 2015-04-17 17:52 | 111 | Sequence data file |
| jp_Efia5iJ.simple.html | 2015-04-17 19:25 | 1.2K | Brief HTML: sequence and prediction only |
![[TXT]](jp_Efia5iJ.svg.html) | jp_Efia5iJ.svg.html | 2015-04-17 19:26 | 40K | Jalview SVG summary of results |
| jp_Efia5iJ.tar.gz | 2015-04-17 19:26 | 2.2M | Archive containing complete results |
